Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq108 215 9e-54 seq1162 156 8e-36 >seq108 Length=150 Score = 215 bits (238), Expect = 9e-54 Identities = 139/151 (92%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 161 TTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTC 220 ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||| Sbjct 1 TTTGTTGGTTTCTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTC 60 Query 221 AATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACC 280 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 61 AATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCC 120 Query 281 AAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| |||||||||||||| ||||||||| Sbjct 121 AAGGACGTTTTCATTAATCA-AGAACGAAAG 150 >seq1162 Length=892 Score = 156 bits (172), Expect = 8e-36 Identities = 126/149 (85%), Gaps = 5/149 (3%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 145 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 90 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 89 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 30 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTT 162 ||||||||||||||||| |||||||||| Sbjct 29 ATAATAGAATAGGACGTTTGGTTCTATTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914988122048