Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq846 188 3e-45 seq19005 105 3e-20 seq17126 102 3e-19 seq189 100 1e-18 seq13197 98.7 4e-18 seq484 98.7 4e-18 seq207 89.7 2e-15 seq6612 86.0 3e-14 seq22607 78.8 4e-12 seq21507 78.8 4e-12 >seq846 Length=141 Score = 188 bits (208), Expect = 3e-45 Identities = 109/112 (97%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 60 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 61 TCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 112 >seq19005 Length=61 Score = 105 bits (116), Expect = 3e-20 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 61 ATGGATTTGAGTAAGAGCATAGCTGTTGGGCCCCGAAAGATGGTGAACTATGCCTGAATA 2 Query 601 G 601 | Sbjct 1 G 1 >seq17126 Length=61 Score = 102 bits (112), Expect = 3e-19 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1 GCACAATCGACCGATCCTGATGTCTTCGGACGGATTTGAGTAAGAGCATAGCTGTTGGGA 60 Query 572 C 572 | Sbjct 61 C 61 >seq189 Length=188 Score = 100 bits (110), Expect = 1e-18 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 131 GTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAA 190 ||||| ||||||||||||| |||||| ||||||||| |||||| |||||||||||||||| Sbjct 1 GTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAA 60 Query 191 AGGGAAGCGC 200 ||||||| || Sbjct 61 AGGGAAGGGC 70 >seq13197 Length=75 Score = 98.7 bits (108), Expect = 4e-18 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||||||||||||||||| ||||||||| |||| ||||||| ||||| |||||||||| Sbjct 2 TCTAAAGCTAAATATTGGCGAGAGACCGACAGCGAACAAGTACCGTGATGGAAAGATGAA 61 Query 147 AAGCACTTTGGAAA 160 ||| |||||| ||| Sbjct 62 AAGAACTTTGAAAA 75 >seq484 Length=63 Score = 98.7 bits (108), Expect = 4e-18 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC 466 |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 63 GCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAAC 4 Query 467 CC 468 || Sbjct 3 CC 2 >seq207 Length=64 Score = 89.7 bits (98), Expect = 2e-15 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 97 AATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| |||||| Sbjct 64 AATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTG 5 Query 157 GAAA 160 ||| Sbjct 4 AAAA 1 >seq6612 Length=61 Score = 86.0 bits (94), Expect = 3e-14 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 ||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||| Sbjct 57 AGGATGCTGGCATAATGGTTATATGCGGCCCGTCTTGAAACACGGACCAAGGAGTCT 1 >seq22607 Length=61 Score = 78.8 bits (86), Expect = 4e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 66 CTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAA 125 |||| |||| |||||||| | ||||||||| ||||||||| |||||||||||||| |||| Sbjct 61 CTAAGTGGGTGGTAAATTCCATCTAAAGCTTAATATTGGCGAGAGACCGATAGCGAACAA 2 Query 126 G 126 | Sbjct 1 G 1 >seq21507 Length=61 Score = 78.8 bits (86), Expect = 4e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||||||||||||||||||||| |||||| ||||||||||||||||||| |||| || Sbjct 2 TCTATGCGAGTGTTTGGGTGTAAAACCCACACGCGTAATGAAAGTGAACGTAGGTTGG 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079503411050