Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq14396 178 4e-42 seq17359 163 1e-37 seq14014 131 6e-28 seq15977 80.6 9e-13 >seq14396 Length=174 Score = 178 bits (196), Expect = 4e-42 Identities = 145/175 (83%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 69 TGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTA 128 |||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 174 TGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAGTTAAACTA 116 Query 129 CCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCA 188 |||||||||||||||||| || ||||| || || |||||||| |||| ||| || Sbjct 115 CCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGAAGCGGCCA 56 Query 189 GAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTC 243 ||||||||||||||| |||||||| |||| |||| || ||| |||||| Sbjct 55 GAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGTCTC 1 >seq17359 Length=228 Score = 163 bits (180), Expect = 1e-37 Identities = 170/222 (77%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 219 ACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAAT 278 |||||||| | | |||||| ||||||||||||||||||| | || | || ||||| Sbjct 7 ACTAGCGTTCCGGTTTCATAGCCTCCCACCTATCCTACACAGATCGGTTCAAAGTCCAAT 66 Query 279 ACCAAGCTATAGTGAAGGTCCC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTT 337 | |||||| ||| ||||| | ||||||||| |||| |||||| | | ||||| | Sbjct 67 GCAAAGCTACAGTAAAGGTTCATGGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCAT 126 Query 338 TACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCAT 397 || ||| ||| ||| | | | || || ||||||| || |||||||||||| Sbjct 127 CACAAACACTTCAACTTCGCTGAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCAT 186 Query 398 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 |||||||||||||||||||||||||||||||||||||||||| Sbjct 187 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 228 >seq14014 Length=397 Score = 131 bits (144), Expect = 6e-28 Identities = 136/175 (78%), Gaps = 5/175 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58 ||||||||| |||||||||| |||| | ||| ||| || |||| || ||| |||| Sbjct 220 TCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCAGCAC--GATTT 277 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| | || | ||||| | | |||||||||| ||||||||| | ||||||| Sbjct 278 CCGACCGTACCTAGCGTACCTTCGTACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCC 336 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGA 173 ||| ||||| || |||| ||||||||||| |||| ||||| |||||||||||||| Sbjct 337 AGTCAAACTGCCTACCATGCACTGTCCCCGACCCGGATCACGGGCCAAGGTTAGA 391 >seq15977 Length=117 Score = 80.6 bits (88), Expect = 9e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGC 59 ||||| ||| |||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct 59 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGC 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702005877376