Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04-
25] 23,151 sequences; 12,698,172 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq14396 178 4e-42
seq17359 163 1e-37
seq14014 131 6e-28
seq15977 80.6 9e-13
>seq14396
Length=174
Score = 178 bits (196), Expect = 4e-42
Identities = 145/175 (83%), Gaps = 1/175 (1%)
Strand=Plus/Minus
Query 69 TGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTA 128
|||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 174 TGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAGTTAAACTA 116
Query 129 CCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCA 188
|||||||||||||||||| || ||||| || || |||||||| |||| ||| ||
Sbjct 115 CCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGAAGCGGCCA 56
Query 189 GAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTC 243
||||||||||||||| |||||||| |||| |||| || ||| ||||||
Sbjct 55 GAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGTCTC 1
>seq17359
Length=228
Score = 163 bits (180), Expect = 1e-37
Identities = 170/222 (77%), Gaps = 1/222 (0%)
Strand=Plus/Plus
Query 219 ACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAAT 278
|||||||| | | |||||| ||||||||||||||||||| | || | || |||||
Sbjct 7 ACTAGCGTTCCGGTTTCATAGCCTCCCACCTATCCTACACAGATCGGTTCAAAGTCCAAT 66
Query 279 ACCAAGCTATAGTGAAGGTCCC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTT 337
| |||||| ||| ||||| | ||||||||| |||| |||||| | | ||||| |
Sbjct 67 GCAAAGCTACAGTAAAGGTTCATGGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCAT 126
Query 338 TACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCAT 397
|| ||| ||| ||| | | | || || ||||||| || ||||||||||||
Sbjct 127 CACAAACACTTCAACTTCGCTGAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCAT 186
Query 398 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439
||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 228
>seq14014
Length=397
Score = 131 bits (144), Expect = 6e-28
Identities = 136/175 (78%), Gaps = 5/175 (3%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58
||||||||| |||||||||| |||| | ||| ||| || |||| || ||| ||||
Sbjct 220 TCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCAGCAC--GATTT 277
Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118
|| ||| | || | ||||| | | |||||||||| ||||||||| | |||||||
Sbjct 278 CCGACCGTACCTAGCGTACCTTCGTACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCC 336
Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGA 173
||| ||||| || |||| ||||||||||| |||| ||||| ||||||||||||||
Sbjct 337 AGTCAAACTGCCTACCATGCACTGTCCCCGACCCGGATCACGGGCCAAGGTTAGA 391
>seq15977
Length=117
Score = 80.6 bits (88), Expect = 9e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGC 59
||||| ||| |||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct 59 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGC 117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702005877376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |