Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq10633 740 0.0 >seq10633 Length=3598 Score = 740 bits (820), Expect = 0.0 Identities = 528/601 (88%), Gaps = 14/601 (2%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 |||||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||| Sbjct 1406 TCGACTACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCG 1348 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | | ||||||||| ||||||||||| Sbjct 1347 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 1288 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1287 GGCAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 1228 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct 1227 TTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTCAACCCTGGTGGGT 1168 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1167 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTAGATCACTTCGCTT 1108 Query 300 CGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACC 357 ||||||| || | || ||| || |||||| |||||||||||||||||||||||| || Sbjct 1107 CGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTTTCGCTACGGCTTCC 1049 Query 358 CCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 ||||||||||||||||||| || | | | |||||||||||||||||||||||||||||| Sbjct 1048 CCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACG 989 Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477 | |||||| || || || ||||| |||||||||||||||| |||||||| Sbjct 988 CTGTCACC-----CC----AGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTTCAG 938 Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| Sbjct 937 GTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCT 878 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597 ||||||||| | | |||||||||||||| | |||||| ||||||||||||||| |||| Sbjct 877 ATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTT 818 Query 598 C 598 | Sbjct 817 C 817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817394974720