Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq274 232 1e-58 seq104 158 2e-36 seq216 127 4e-27 seq8767 122 2e-25 >seq274 Length=1583 Score = 232 bits (256), Expect = 1e-58 Identities = 175/204 (86%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 1382 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 1441 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1442 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1501 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 1502 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGT--CTAACCTTGGCC 1559 Query 199 GGAAGGTCTGGGTAATCTTGTTAA 222 | |||||| ||||||||||| || Sbjct 1560 GAGAGGTCTTGGTAATCTTGTGAA 1583 >seq104 Length=878 Score = 158 bits (174), Expect = 2e-36 Identities = 98/105 (93%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 224 CTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTA 283 ||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 878 CTCCGTCGTGCTGGGGATAGAGCATTGTAATTATTGCTCTTCAACGAGGAATTCCTAGTA 819 Query 284 AGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 818 AGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 774 >seq216 Length=97 Score = 127 bits (140), Expect = 4e-27 Identities = 88/99 (89%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 |||||| ||||| | |||||||||| |||||| ||||||||||| |||||| ||||| Sbjct 97 GAGCCAGCGAGTCTA--ACCTTGGCCGAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGT 40 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271 |||||||||||||||||| |||||||||||||||||||| Sbjct 39 GCTGGGGATAGAGCATTGTAATTATTGCTCTTCAACGAG 1 >seq8767 Length=97 Score = 122 bits (134), Expect = 2e-25 Identities = 87/99 (88%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 |||||| ||||| | |||||||||| |||||| ||||||||||| || ||| ||||| Sbjct 97 GAGCCAGCGAGTCTA--ACCTTGGCCGAGAGGTCTTGGTAATCTTGTGAACCTCCGTCGT 40 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271 |||||||||||||||||| |||||||||||||||||||| Sbjct 39 GCTGGGGATAGAGCATTGTAATTATTGCTCTTCAACGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947093155840