Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177905.1_202017-04- 25] 4,892 sequences; 11,751,231 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4849 322 1e-85 seq3346 109 2e-21 seq3108 104 7e-20 >seq4849 Length=356 Score = 322 bits (356), Expect = 1e-85 Identities = 291/360 (81%), Gaps = 11/360 (3%) Strand=Plus/Minus Query 42 CGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCT 101 ||||||||||| |||||||| || ||||||||| |||||||||||||||||||||| || Sbjct 356 CGCACAAGCGGCGGAGCATGCGGATTAATTCGATGCAACGCGAAGAACCTTACCAAGGCT 297 Query 102 TGACATCCTCT-GACCCCTCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGA-GTG-ACA 158 |||||| | | || || | |||||| | ||| || || ||||| ||| ||| Sbjct 296 TGACATGCACGAGAAGCCACCAGAGATGGTGGTCTCT--TT----GGACACTCGTGCACA 243 Query 159 GGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAG 218 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 242 GGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAG 183 Query 219 CGCAACCCTTAAGCTTAGTTGCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGT 276 ||||||||| | ||||||| | ||| | ||| |||| | ||||||||| Sbjct 182 CGCAACCCTCGTCCCATGTTGCCAGCGGGTTATGCCGGGGACTCATGGGAGACTGCCGGG 123 Query 277 GACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTA 336 | ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 122 GTCAACTCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGTCTTGGGCTT 63 Query 337 CACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCA 396 ||| | ||||||||||| | |||||||||| |||| |||| |||| ||| ||||||| Sbjct 62 CACGCATGCTACAATGGCCGGTACAAAGGGCTGCGATACCGTAAGGTGGAGCGAATCCCA 3 >seq3346 Length=134 Score = 109 bits (120), Expect = 2e-21 Identities = 80/92 (87%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 406 TCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGT 465 ||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||| Sbjct 3 TCTCAGTTCGGATTGGGGTCTGCAACTCGACCCCATGAAGTCGGAGTCGCTAGTAATCGC 62 Query 466 AGATCAGC-ATGCTACGGTGAATACGTTCCCG 496 |||||||| | ||| ||||||||||||||||| Sbjct 63 AGATCAGCAACGCTGCGGTGAATACGTTCCCG 94 >seq3108 Length=529 Score = 104 bits (114), Expect = 7e-20 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| | |||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 453 TACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCAT 512 Query 61 GTGGTTTAATTCGAAGC 77 | || ||||||||| || Sbjct 513 GCGGATTAATTCGATGC 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503926424320