Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177905.1_202017-04- 25] 4,892 sequences; 11,751,231 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq390 183 1e-43 seq4474 158 4e-36 >seq390 Length=144 Score = 183 bits (202), Expect = 1e-43 Identities = 129/145 (89%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 226 CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGAT 285 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1 CAACCCTGGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCT 60 Query 286 AGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTCGCTT 343 ||||||||||||||||||||| || | || ||| || |||||| ||||||||||||| Sbjct 61 AGATCACTTCGCTTCGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTT 119 Query 344 TCGCTACGGCTACCCCACACGGGTT 368 ||||||||||| |||||||| |||| Sbjct 120 TCGCTACGGCTTCCCCACACTGGTT 144 >seq4474 Length=271 Score = 158 bits (174), Expect = 4e-36 Identities = 118/136 (87%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 |||||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||| Sbjct 135 TCGACTACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCG 77 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | | ||||||||| ||||||||||| Sbjct 76 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 17 Query 120 GGGAAGAAACACGCGA 135 || |||||||||| || Sbjct 16 GGCAAGAAACACGTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817511083008