Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177905.1_202017-04- 25] 4,892 sequences; 11,751,231 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq3108 230 6e-58 >seq3108 Length=529 Score = 230 bits (254), Expect = 6e-58 Identities = 188/225 (84%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||||||| ||||||||||| |||||| |||||| |||||||||||| ||||||||| Sbjct 232 TGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGG 291 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 | | | |||| | | ||||||| |||||| ||||||| |||||||| ||||||||||| Sbjct 292 CAGGTCTCTGGGCCGCAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGATTAG 351 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT---AAGTG 363 |||||||||||||||| |||||||||| || ||||||||| ||||| ||| | | | Sbjct 352 ATACCCTGGTAGTCCATGCCGTAAACGTTGGGCACTAGGTGT-GGGGCTCATTCCACGAG 410 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| ||||||||||||||||| ||||| || ||||||||||| Sbjct 411 TTCC-GTGCCGCAGCAAACGCATTAAGTGCCCCGCCTGGGGAGTA 454 Score = 134 bits (148), Expect = 3e-29 Identities = 104/124 (84%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| || || ||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 15 TACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGC 74 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 |||||| |||||||||| ||||||||||| | |||||| ||||| | ||| | || Sbjct 75 AAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGTTTGTCGCGTCTGGTGT 134 Query 121 GAAA 124 |||| Sbjct 135 GAAA 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203141139456