Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177905.1_202017-04- 25] 4,892 sequences; 11,751,231 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq390 109 2e-21 seq4474 98.7 3e-18 >seq390 Length=144 Score = 109 bits (120), Expect = 2e-21 Identities = 94/116 (81%), Gaps = 3/116 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 ||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| || Sbjct 116 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 57 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTG 114 |||| |||| ||||| ||||| || | |||||| |||||||||| | |||| Sbjct 56 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTG 1 >seq4474 Length=271 Score = 98.7 bits (108), Expect = 3e-18 Identities = 146/205 (71%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 273 CAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332 |||||||||||||| | ||| | || || |||||| ||| | |||| ||||| Sbjct 70 CAAACTCCGAATGCCGGTAAGTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGT 129 Query 333 GCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAA 392 ||||||| || | || ||| | | ||||||||||| || | ||||||| | Sbjct 130 AGTCGAGAGGGAAACAGCCCAGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA 189 Query 393 CTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452 || || || |||| ||||| | |||| |||||||| |||||||||| | || | Sbjct 190 --AAGGATGTGGAGTTGCACAGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGA 246 Query 453 AAGAGTGCGTAACAGCTCACTAGTC 477 |||||||||||| |||||||| ||| Sbjct 247 AAGAGTGCGTAATAGCTCACTGGTC 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689517344768