Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq2673 197 3e-48
seq3567 190 4e-46
>seq2673
Length=417
Score = 197 bits (218), Expect = 3e-48
Identities = 241/325 (74%), Gaps = 9/325 (3%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| |||| || ||||| | ||||||||| || | |
Sbjct 396 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAACAGTCGGAGCCTCGTAAGG-G 338
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-CACCAGCGAGGTTAAG 129
|||||||||| ||||||| |||||| | | ||| ||| ||| || ||| || ||||
Sbjct 337 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA--CGTTCAGTAGCAAGCTTAAC 280
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
| | ||| || || || ||||||||| | || |||||| ||||| |||
Sbjct 279 CGTATAGGGC-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTTGCTGGGC 225
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
||||| ||||||| |||||||| ||| | |||| ||||| |||||||| ||| ||
Sbjct 224 GTAGACCCGAAACCAGGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGTACTG 165
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| ||||||| |||||||||||||| |||||| | || |||||||||||||
Sbjct 164 GAGGTCCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 105
Query 310 CCAATCAAACTGGGAAATAGCTCGT 334
| || ||||| |||||||||| ||
Sbjct 104 CTAAACAAACCTGGAAATAGCTGGT 80
>seq3567
Length=3392
Score = 190 bits (210), Expect = 4e-46
Identities = 253/342 (74%), Gaps = 17/342 (5%)
Strand=Plus/Minus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60
|| |||| | ||||| ||||||||| |||||| ||| | |||||||| | || ||||||
Sbjct 2733 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 2675
Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118
| | | |||||| |||||||||||| | ||||||||| ||||||||| |||
Sbjct 2674 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 2615
Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178
|||||||||| | | || | ||||| || ||||||||| | ||||||||| |
Sbjct 2614 GCGAGGTTAACC-CGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 2559
Query 179 A--GTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCG 236
| || | ||| |||||| |||| | |||||||| ||| | ||||||||||| ||||
Sbjct 2558 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 2500
Query 237 G-TAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCG 292
| ||| |||||| |||||||||||| | |||||||| | ||||||| |
Sbjct 2499 GGTAAGACCGCGTG---GAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTG 2443
Query 293 CGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
|| |||||||||||||||||||||||| | |||||| ||
Sbjct 2442 TGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 2401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972754200576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |