Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq3018 120 3e-25 seq3567 87.8 2e-15 >seq3018 Length=533 Score = 120 bits (132), Expect = 3e-25 Identities = 140/182 (77%), Gaps = 9/182 (5%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || |||||| |||||||| | || ||||||||||||||||| Sbjct 43 GGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGCGGTAGCCTGCGAAAAGCTACGGG 102 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGAT-ATATTGGA 125 || ||||| | | | ||||||||||||| ||||||||||| ||||| | | ||||| Sbjct 103 GAGCTGGCAAACAAGCTTTGATCCGTAGATGTCCGAATGGGGAAACCCACTCCTTTTGGA 162 Query 126 G-AT--ATATCATAACGC-TAGGC---GTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178 | || || | || | ||||| | | ||||||| || ||||||||||||||||| Sbjct 163 GTATCCATGGCTGAATACATAGGCCATGCGAAGCGAACGCGGTGAACTGAAACATCTAAG 222 Query 179 TA 180 || Sbjct 223 TA 224 >seq3567 Length=3392 Score = 87.8 bits (96), Expect = 2e-15 Identities = 89/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| | ||||||||||| ||| || |||| |||||||||||||| || |||||| ||| Sbjct 3274 GGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATAAG 3215 Query 61 CTACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 | |||||| ||||| | | ||||||| | | ||||||||||| ||||| Sbjct 3214 CCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCC 3160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476778253748