Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1764 212 1e-52 seq1250 205 2e-50 seq4353 93.3 9e-17 >seq1764 Length=1162 Score = 212 bits (234), Expect = 1e-52 Identities = 136/146 (93%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 1017 CTTTACAACCCGAAGGCCTTCTT-CACACACGCGGCATTG-CTGGATCAGGCTTTCGCCC 1074 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 1075 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 1134 Query 121 TGTGACTGATCATCCTCTCAGACCAG 146 |||| ||| || |||||||||||||| Sbjct 1135 TGTGGCTGGTCGTCCTCTCAGACCAG 1160 >seq1250 Length=2028 Score = 205 bits (226), Expect = 2e-50 Identities = 162/192 (84%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| ||||| | | | |||||||| | | ||| |||||||||||||||| Sbjct 1126 TTTACAACCCGAAGGCCTTCATCC-CTCACGCGGCGTCG-CTGCATCAGGCTTTCGCCCA 1183 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 1184 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 1243 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | | || |||||||| || | ||| ||||||||||||| ||||| ||| ||| Sbjct 1244 GTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTAGGCCATCACCCCAC 1303 Query 182 CAACTAGCTAAT 193 |||| |||| || Sbjct 1304 CAACAAGCTGAT 1315 >seq4353 Length=669 Score = 93.3 bits (102), Expect = 9e-17 Identities = 93/119 (78%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 220 AGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCG--TTTC 277 |||||||||||||||| |||||| |||||| |||||||||||||| |||| |||| Sbjct 2 AGGCCCGAAGGTCCCCCGCTTTCATCCGTAGATCGTATGCGGTATTA--ATCCGGCTTTC 59 Query 278 CGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 | ||||||||||||| | || |||| | | ||||||||||||| |||| ||| Sbjct 60 GCCGGGCTATCCCCCACTACAGGACATGTTCCGATGTATTACTCACCCGTTCGCCACTC 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071949530240