Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3567 740 0.0 seq2673 295 2e-77 seq3018 113 2e-22 >seq3567 Length=3392 Score = 740 bits (820), Expect = 0.0 Identities = 528/601 (88%), Gaps = 14/601 (2%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 |||||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||| Sbjct 2238 TCGACTACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCG 2296 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | | ||||||||| ||||||||||| Sbjct 2297 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 2356 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2357 GGCAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 2416 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct 2417 TTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTCAACCCTGGTGGGT 2476 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2477 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTAGATCACTTCGCTT 2536 Query 300 CGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACC 357 ||||||| || | || ||| || |||||| |||||||||||||||||||||||| || Sbjct 2537 CGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTTTCGCTACGGCTTCC 2595 Query 358 CCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 ||||||||||||||||||| || | | | |||||||||||||||||||||||||||||| Sbjct 2596 CCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACG 2655 Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477 | |||||| || || || ||||| |||||||||||||||| |||||||| Sbjct 2656 CTGTCACC-----CC----AGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTTCAG 2706 Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| Sbjct 2707 GTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCT 2766 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597 ||||||||| | | |||||||||||||| | |||||| ||||||||||||||| |||| Sbjct 2767 ATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTT 2826 Query 598 C 598 | Sbjct 2827 C 2827 >seq2673 Length=417 Score = 295 bits (326), Expect = 2e-77 Identities = 327/428 (76%), Gaps = 20/428 (5%) Strand=Plus/Plus Query 91 CCCCCTAGACCATC-CAGTGCTCTACCTCCGG-GAAGAAACACGCGACGCTGCACCTAAA 148 ||||| | ||||| |||||||||||| ||| | || ||||| | | || ||||||| Sbjct 8 CCCCCCA-ACCATGACAGTGCTCTACCCCCGAAGGTGAGACACGAGGCACT--ACCTAAA 64 Query 149 TGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAG 208 | |||||| ||||||||||||| | | ||||| || ||||||||||||||||||||| Sbjct 65 TAGTTTTCGGAGAGAACCAGCTATTTCCAGGTTTGTTTAGCCTTTCACCCCTATCCACAG 124 Query 209 GTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCT 268 ||||||||| | |||||||| | ||||||||||| |||||| || ||||| || Sbjct 125 CTCATCCCCTAACTTTTCAACGTTAGTGGGTTCGGACCTCCAGTACGTGTTACCGCACCT 184 Query 269 TCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCC 328 ||| |||| ||||||||||||||| | | ||||||||| | || ||| | |||||| Sbjct 185 TCATCCTGGCCATGGATAGATCACCTGGTTTCGGGTCTACGCCCAGCAACTGA-ACGCCC 243 Query 329 TATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAA 388 ||||||||||||||||||||||| || ||| | || |||||| || || || |||| | Sbjct 244 TATTCGGACTCGCTTTCGCTACGCCTGCCCTATAC-GGTTAAGCTTGCTACTGAACG-TA 301 Query 389 ACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGC 448 | |||| | | |||| | ||||||| ||||||||||| | || || || Sbjct 302 AGTCGCTGACCCATTATACAAAAGGTACGCCGTCACC----CCTTACGAG--------GC 349 Query 449 TCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTT 508 |||||| | ||||| ||| ||||||||| |||||||||||||| || ||||| |||| Sbjct 350 TCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTT 409 Query 509 TCACCTTT 516 || ||||| Sbjct 410 TCGCCTTT 417 >seq3018 Length=533 Score = 113 bits (124), Expect = 2e-22 Identities = 101/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 473 TTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGT 532 |||||| |||||||||||||| || ||||| |||||| |||||||||||||||||| || Sbjct 533 TTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGT 474 Query 533 CCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGA 592 | ||||||||| | |||||||||| ||| || ||||||| ||| |||| || Sbjct 473 TCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTTCAGACAG 414 Query 593 AATTTCA 599 |||||| Sbjct 413 GATTTCA 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817514427392