Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2673 311 2e-82 seq3567 268 2e-69 seq3018 194 4e-47 >seq2673 Length=417 Score = 311 bits (344), Expect = 2e-82 Identities = 267/316 (84%), Gaps = 12/316 (4%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| || ||||||||| ||||| |||| ||||||| |||||||| | Sbjct 114 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGACCTCCAGTACG 171 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| | Sbjct 172 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACG-C 226 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||| ||| |||||||| | |||||||||| |||||||||| |||||| |||||||| Sbjct 227 CCAGCAACTGAACGCCCTATTCGGACTCGCTTT-CGCTACGCCTGCCCTATACGGTTAAG 285 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| || |||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct 286 CTT-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC--CTT 342 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | |||||| |||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 343 ACGAGGCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 401 Query 304 GGTTCTTTTCGCCTTT 319 |||||||||||||||| Sbjct 402 GGTTCTTTTCGCCTTT 417 >seq3567 Length=3392 Score = 268 bits (296), Expect = 2e-69 Identities = 316/414 (76%), Gaps = 13/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| || | | |||||||| | || |||||||||||||| || || Sbjct 2440 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TT 2496 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||| ||| |||||||||||| || |||||| | | || |||||||| |||||| Sbjct 2497 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGC 2552 Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTT 186 ||||| | |||||| | |||||||||| ||||||| || ||| | ||| | | | | Sbjct 2553 GACTATGGGCGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCT 2611 Query 187 TGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAA 244 |||||||| | ||| |||| | | |||| | ||||||| |||| ||||||| | | || Sbjct 2612 CGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAA 2671 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | |||||| || | ||||| ||| ||||||||||| |||||||||||||||| ||||| Sbjct 2672 GGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGG 2730 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| |||||||||||||||||| || | |||||||||| | ||||||||||| Sbjct 2731 GTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGG 2790 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||| | ||||| ||| ||||| || | ||||||| || |||| ||||| Sbjct 2791 CTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 2844 >seq3018 Length=533 Score = 194 bits (214), Expect = 4e-47 Identities = 130/144 (90%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 275 TTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAG 334 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 533 TTCAGGATCTATTTCACTCCCCTC-CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGG 475 Query 335 TTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACA 394 ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 474 TTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTTCAGACA 415 Query 395 AAGTTTCTCGTGCTCCGTCCTACT 418 |||| |||| ||| |||||| Sbjct 414 GGATTTCACGTGTCCCGCCCTACT 391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241541545472