Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq2673 311 2e-82
seq3567 268 2e-69
seq3018 194 4e-47
>seq2673
Length=417
Score = 311 bits (344), Expect = 2e-82
Identities = 267/316 (84%), Gaps = 12/316 (4%)
Strand=Plus/Plus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| |||||||| |||| || ||||||||| ||||| |||| ||||||| |||||||| |
Sbjct 114 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGACCTCCAGTACG 171
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| |
Sbjct 172 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACG-C 226
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183
||||| ||| |||||||| | |||||||||| |||||||||| |||||| ||||||||
Sbjct 227 CCAGCAACTGAACGCCCTATTCGGACTCGCTTT-CGCTACGCCTGCCCTATACGGTTAAG 285
Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243
||| || |||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct 286 CTT-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC--CTT 342
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303
| |||||| |||| ||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 343 ACGAGGCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 401
Query 304 GGTTCTTTTCGCCTTT 319
||||||||||||||||
Sbjct 402 GGTTCTTTTCGCCTTT 417
>seq3567
Length=3392
Score = 268 bits (296), Expect = 2e-69
Identities = 316/414 (76%), Gaps = 13/414 (3%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||||||||| || | | |||||||| | || |||||||||||||| || ||
Sbjct 2440 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TT 2496
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||| ||| |||||||||||| || |||||| | | || |||||||| ||||||
Sbjct 2497 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGC 2552
Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTT 186
||||| | |||||| | |||||||||| ||||||| || ||| | ||| | | | |
Sbjct 2553 GACTATGGGCGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCT 2611
Query 187 TGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAA 244
|||||||| | ||| |||| | | |||| | ||||||| |||| ||||||| | | ||
Sbjct 2612 CGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAA 2671
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
| |||||| || | ||||| ||| ||||||||||| |||||||||||||||| |||||
Sbjct 2672 GGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGG 2730
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| |||||||||||||||||| || | |||||||||| | |||||||||||
Sbjct 2731 GTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGG 2790
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||| | ||||| ||| ||||| || | ||||||| || |||| |||||
Sbjct 2791 CTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 2844
>seq3018
Length=533
Score = 194 bits (214), Expect = 4e-47
Identities = 130/144 (90%), Gaps = 1/144 (1%)
Strand=Plus/Minus
Query 275 TTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAG 334
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 533 TTCAGGATCTATTTCACTCCCCTC-CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGG 475
Query 335 TTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACA 394
||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 474 TTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTTCAGACA 415
Query 395 AAGTTTCTCGTGCTCCGTCCTACT 418
|||| |||| ||| ||||||
Sbjct 414 GGATTTCACGTGTCCCGCCCTACT 391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241541545472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |