Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3567 425 1e-116 seq1867 168 2e-39 >seq3567 Length=3392 Score = 425 bits (470), Expect = 1e-116 Identities = 350/430 (81%), Gaps = 31/430 (7%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| ||||||||| || ||| || || Sbjct 1812 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCC 1871 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| | |||||||||||| ||| |||||||| ||||||||||||||| Sbjct 1872 CTGGAACCCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTG 1931 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||||| | ||||||| | || ||| || |||||||| | ||||||| Sbjct 1932 CATTCTCACTCGTGTGGGCTCCACCGCTGGGTTCCCCCGCGGCTTCACCGCCCACACGAC 1991 Query 181 GCTCCCCTACCCA-------------ACCACACAGGT----------------TGCCACA 211 ||||||||||||| ||||| ||| |||||| Sbjct 1992 GCTCCCCTACCCACCTGCGCCTCTGGACCACGAAGGCCTGAGTTGAGCGCAGATGCCACG 2051 Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 2052 GCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGACCAGTGAG 2111 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| Sbjct 2112 CTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCTGTGCAA 2171 Query 332 CTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 ||||||||||||||||||| || ||| | ||||||||||||||| | || |||||||||| Sbjct 2172 CTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCTGGGCTGT 2230 Query 391 TTCCCTCTCG 400 |||||||||| Sbjct 2231 TTCCCTCTCG 2240 >seq1867 Length=770 Score = 168 bits (186), Expect = 2e-39 Identities = 285/406 (70%), Gaps = 19/406 (5%) Strand=Plus/Plus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||||| || || ||| | | | Sbjct 325 CTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 384 Query 64 GAACCCTTGGATAATCGGCGGACGGGA--TTCCCACCCGTCACACGCTACTCATGCCTGC 121 ||| |||||| ||||| ||| ||| | ||| | | ||||||||||| | || Sbjct 385 GAAACCTTGGGCTTACGGCGAGGGGGCCTTTCACCCCCTTTAT-CGCTACTCATGTCAGC 443 Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180 |||| |||| | | ||||| ||| | | || |||| |||| | || || || Sbjct 444 ATTCGCACTTCCGATACCTCCAGCACCCTTT-ACAAGGCACCTTCGCAGGCTTACGGAAC 502 Query 181 GCTCCCCTACCC--------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 |||| |||||| || ||| || || ||||||||| ||| |||| || Sbjct 503 GCTCTCCTACCATGCGTGCTAAGCACGCAT----CCGCAGCTTCGGTATATAGCTTA-GC 557 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| ||||| || |||| | | ||| || |||||||||||||||| ||||| |||| Sbjct 558 CCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGG 617 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| |||||||||||||| ||| | || |||| || ||||||||| | Sbjct 618 GTGGCTGCTTCTAAGCCAACCTCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTA 677 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | | || ||| ||||||||| | |||||| ||||||||||| Sbjct 678 G-CTATATTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177544558592