Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04-
25] 4,708 sequences; 12,504,838 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq1250 405 2e-110
seq1764 269 8e-70
>seq1250
Length=2028
Score = 405 bits (448), Expect = 2e-110
Identities = 377/475 (79%), Gaps = 8/475 (2%)
Strand=Plus/Minus
Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82
|| |||| ||||||||||||| |||| |||||||||||| || ||||||| |
Sbjct 1458 AGTGGCGAACGGGTGAGTAACACGTGAGTAACCTGCCCTTGACTTCGGGATAACTCCGGG 1399
Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142
||| |||||||| |||| | | | |||||||| | || |||| |
Sbjct 1398 AAACCGGGGCTAATACCGGATATGAGCCGTCC-TCGCATGGGGGTGGTTGGAAAGTTTTT 1340
Query 143 GCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGC 202
|||| |||| | | |||| | || |||| |||||| ||| | ||| |||||||||
Sbjct 1339 -CGGTCAGGGATGGGCTCGCGGCCTATCAGCTTGTTGGTGGGGTGATGGCCTACCAAGGC 1281
Query 203 GACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAA 262
||||| ||||||| |||||||||| || |||||||| ||| |||||||||||| |||
Sbjct 1280 GACGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACACTGGGACTGAGACACGGCCCAG 1221
Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1220 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCGA 1161
Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-----T 377
||||||||||| ||||||||||||||||| ||||| |||| || || ||||||
Sbjct 1160 CGCCGCGTGAGGGATGAAGGCCTTCGGGTTGTAAACCTCTTTCAGCAGGGAAGAAGCGCA 1101
Query 378 AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437
| ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1100 AGTGACGGTACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 1041
Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492
||||| || |||||| |||||||||| | |||||||||| | |||||| |||||
Sbjct 1040 TAGGGCGCAAGCGTTGTCCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGTTT 987
>seq1764
Length=1162
Score = 269 bits (298), Expect = 8e-70
Identities = 241/304 (79%), Gaps = 26/304 (9%)
Strand=Plus/Minus
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
|||||||| || | |||||| ||| |||||||||||| ||| |||||||||||||||||
Sbjct 1155 CTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 1096
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||| ||| ||||||||| |||||||||| |||||| |||||||| | || ||
Sbjct 1095 CAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGA 1036
Query 340 AGGCCTTCGGGTCGTAAAGC---TCTGTCCTCAAGGAA------------GATA------ 378
|||||||||||| ||||||| | ||||| || ||| |||
Sbjct 1035 AGGCCTTCGGGTTGTAAAGCACTTTTGTCCGGAAAGAAATCCTTGGCTCTAATACAGTCG 976
Query 379 ----ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 434
|||||||||| || || |||| ||||||||||||||||||||||||||||||||
Sbjct 975 GGGGATGACGGTACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 916
Query 435 ACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCT 494
|||||||| || ||||||| |||||||||| |||||||||| ||||| ||| |||||
Sbjct 915 ACGTAGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGC 857
Query 495 TAAG 498
||||
Sbjct 856 TAAG 853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497529492992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |