Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1250 405 2e-110 seq1764 269 8e-70 >seq1250 Length=2028 Score = 405 bits (448), Expect = 2e-110 Identities = 377/475 (79%), Gaps = 8/475 (2%) Strand=Plus/Minus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 || |||| ||||||||||||| |||| |||||||||||| || ||||||| | Sbjct 1458 AGTGGCGAACGGGTGAGTAACACGTGAGTAACCTGCCCTTGACTTCGGGATAACTCCGGG 1399 Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142 ||| |||||||| |||| | | | |||||||| | || |||| | Sbjct 1398 AAACCGGGGCTAATACCGGATATGAGCCGTCC-TCGCATGGGGGTGGTTGGAAAGTTTTT 1340 Query 143 GCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGC 202 |||| |||| | | |||| | || |||| |||||| ||| | ||| ||||||||| Sbjct 1339 -CGGTCAGGGATGGGCTCGCGGCCTATCAGCTTGTTGGTGGGGTGATGGCCTACCAAGGC 1281 Query 203 GACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAA 262 ||||| ||||||| |||||||||| || |||||||| ||| |||||||||||| ||| Sbjct 1280 GACGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACACTGGGACTGAGACACGGCCCAG 1221 Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 1220 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCGA 1161 Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-----T 377 ||||||||||| ||||||||||||||||| ||||| |||| || || |||||| Sbjct 1160 CGCCGCGTGAGGGATGAAGGCCTTCGGGTTGTAAACCTCTTTCAGCAGGGAAGAAGCGCA 1101 Query 378 AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437 | ||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| Sbjct 1100 AGTGACGGTACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 1041 Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 ||||| || |||||| |||||||||| | |||||||||| | |||||| ||||| Sbjct 1040 TAGGGCGCAAGCGTTGTCCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGTTT 987 >seq1764 Length=1162 Score = 269 bits (298), Expect = 8e-70 Identities = 241/304 (79%), Gaps = 26/304 (9%) Strand=Plus/Minus Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 |||||||| || | |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 1155 CTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 1096 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| ||| ||||||||| |||||||||| |||||| |||||||| | || || Sbjct 1095 CAGTGGGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGA 1036 Query 340 AGGCCTTCGGGTCGTAAAGC---TCTGTCCTCAAGGAA------------GATA------ 378 |||||||||||| ||||||| | ||||| || ||| ||| Sbjct 1035 AGGCCTTCGGGTTGTAAAGCACTTTTGTCCGGAAAGAAATCCTTGGCTCTAATACAGTCG 976 Query 379 ----ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 434 |||||||||| || || |||| |||||||||||||||||||||||||||||||| Sbjct 975 GGGGATGACGGTACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 916 Query 435 ACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCT 494 |||||||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||| Sbjct 915 ACGTAGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGC 857 Query 495 TAAG 498 |||| Sbjct 856 TAAG 853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497529492992