Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq2673 358 2e-96 seq3567 257 6e-66 >seq2673 Length=417 Score = 358 bits (396), Expect = 2e-96 Identities = 234/255 (92%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||||||| |||||| |||| |||||| ||||||||||||||| |||||||| |||| Sbjct 255 CGAGTCCGAATAGGGCGTTCAGTTGCTGGGCGTAGACCCGAAACCAGGTGATCTATCCAT 196 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | Sbjct 195 GGCCAGGATGAAGGTGCGGTAACACGTACTGGAGGTCCGAACCCACTAACGTTGAAAAGT 136 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 135 TAGGGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACCTGGAAATAGCTGGTTCTC 76 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 |||||||||||||||||||||||||| || ||||| |||||||||||||||||| |||| Sbjct 75 TCCGAAAACTATTTAGGTAGTGCCTCGTGTCTCACCTTCGGGGGTAGAGCACTGTCATGG 16 Query 241 CTAGGGGGTC-ATTG 254 | ||||||| |||| Sbjct 15 TTGGGGGGTCTATTG 1 >seq3567 Length=3392 Score = 257 bits (284), Expect = 6e-66 Identities = 392/545 (72%), Gaps = 20/545 (4%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 ||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| || Sbjct 2578 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 2519 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 |||| |||| ||||| ||||| || | |||||| |||||||||| | |||||||| Sbjct 2518 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 2459 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 | |||||||| |||||| |||||||||||||| || ||||||| | ||||||||||| Sbjct 2458 CCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTC 2399 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTT 236 || |||||| |||||||| || ||| || | | ||| |||||||| |||| Sbjct 2398 TCCCCGAAATGCATTTAGGTGCAGCGTCACGTGTTTCTTGCCGGAGGTAGAGCTACTG-G 2340 Query 237 ATGG-CTAGGGG---GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA 292 |||| | | ||| || | ||| || | | |||||||||||||| | | Sbjct 2339 ATGGCCGATGGGCCCTACAAGGTTACTGACGTCAGC----CAAACTCCGAATGCCGGTAA 2284 Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352 || | || || |||||| ||| | |||| ||||| ||||||| || | || Sbjct 2283 GTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGTAGTCGAGAGGGAAACAGCCC 2224 Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412 ||| | | ||||||||||| || | ||||||| | || || || |||| Sbjct 2223 AGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGCAC 2166 Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472 ||||| | |||| |||||||| |||||||||| | || ||||||||||||| ||||||| Sbjct 2165 AGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCAC 2107 Query 473 TAGTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530 | ||| || || || ||| || ||| | |||| | |||| | ||||||| ||| Sbjct 2106 TGGTCAAGTGATTC-CGCGCCGACAATGTAGCGGGGCTCAAGTACACCGCCGAAGCCGTG 2048 Query 531 GGATC 535 | ||| Sbjct 2047 GCATC 2043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689520453632