Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3567 565 8e-159 seq3564 340 6e-91 >seq3567 Length=3392 Score = 565 bits (626), Expect = 8e-159 Identities = 481/604 (80%), Gaps = 47/604 (8%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 680 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 739 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| Sbjct 740 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 798 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||||||||||||||||| || ||||| || || |||||||| |||| Sbjct 799 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGA 858 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| ||||||||||||||||| |||||||| |||| |||| || ||| ||| Sbjct 859 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGT 918 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTG-------- 292 |||||||||||||||||||| |||||||||| ||||||| Sbjct 919 CTCCCACCTATCCTACACAAGCCGCACCGAACACCAATACNNNNNNNNNNNNNNNNNNNN 978 Query 293 --------------------------------AAGGTCCCGGGGTCTTTTCGTCCTGCCG 320 ||||||||||||||||| |||||||| | Sbjct 979 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTCCCGGGGTCTTTCCGTCCTGCTG 1038 Query 321 CGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAG 380 |||| |||||||||||||||||||| ||||||||| ||| | | |||||||||||| | Sbjct 1039 CGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGAGTTCGCGGTTGAGACAGCGG 1098 Query 381 GGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTT 440 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1099 AGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTT 1158 Query 441 AGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCA 500 |||||||||||||||||||||||||||||||||||||| |||| || |||| | | | Sbjct 1159 AGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTGAGCTTCAC-CCCGA 1217 Query 501 CGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | ||| | || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1218 AG-GGT----TGACCCGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 1272 Query 561 CTCG 564 ||| Sbjct 1273 ATCG 1276 >seq3564 Length=693 Score = 340 bits (376), Expect = 6e-91 Identities = 417/566 (74%), Gaps = 25/566 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58 ||||||||| |||||||||| |||| | ||| ||| || |||| || ||| |||| Sbjct 128 TCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCAGCAC--GATTT 185 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| | || | ||||| | | |||||||||| ||||||||| | ||||||| Sbjct 186 CCGACCGTACCTAGCGTACCTTCGTACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCC 244 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178 ||| ||||| || |||| ||||||||||| |||| ||||| |||||||||||||| | Sbjct 245 AGTCAAACTGCCTACCATGCACTGTCCCCGACCCGGATCACGGGCCAAGGTTAGAACCTC 304 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | ||| |||||||||||| ||| |||||| |||||||| | | ||||| Sbjct 305 AAACAAACCAGGGTGGTATTTCAAGGACGGCTCCACCGAAACTAGCGTTCCGGTTTCATA 364 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | ||||||||||||||||||| | || | || ||||| | |||||| ||| ||||| Sbjct 365 GCCTCCCACCTATCCTACACAGATCGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTT 424 Query 299 CC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | ||||||||| |||| |||||| | | ||||| | || ||| ||| ||| | Sbjct 425 CATGGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACACTTCAACTTCGC 484 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || || ||||||| || |||||||||||||||||||||||||||||||| Sbjct 485 TGAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 544 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| || Sbjct 545 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGACT 604 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||||| | | || ||| ||| ||| |||| ||||| |||| Sbjct 605 TCAATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCGGCAC 645 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||| || ||||| || Sbjct 646 CGGGCAGGCGTCACACCCTATACGTC 671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702319851008