Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1250 163 6e-38 seq1764 149 1e-33 >seq1250 Length=2028 Score = 163 bits (180), Expect = 6e-38 Identities = 213/295 (72%), Gaps = 15/295 (5%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| |||| ||| |||||| || || | | Sbjct 1052 GGCTGCTGGCACGTAGTTAGCCGGCGCTTCTTCTGCAGGTACCGTCA--CTTGCGC---- 1105 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || |||||| | ||||| |||||||| ||| || ||||||||| |||||| Sbjct 1106 --------TTCTTCCCTGCTGAAAGAGGTTTACAACCCGAAGG-CCTTCATCCCTCACGC 1156 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| || ||| |||||| ||||||||| |||||||||||||||||| Sbjct 1157 GGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 1216 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| | | |||||||| | ||| || | Sbjct 1217 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGT 1276 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 ||| | || ||| |||| | ||||| || || | || || | ||| |||||| Sbjct 1277 CGTCGCCTTGGTAGGCCATCACCCCACCAACAAGCTGATAGGCCGCGAGCCCATC 1331 >seq1764 Length=1162 Score = 149 bits (164), Expect = 1e-33 Identities = 175/234 (75%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACG- 59 ||||||||||||| ||||||||| ||||||||| | ||||| || | || || Sbjct 924 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCCGGTACCGTCATCCCCCGACTGTA 983 Query 60 -TGGA----AGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | || ||| ||| || || | ||||| ||||||| ||| || ||||| || Sbjct 984 TTAGAGCCAAGGATTTCTTTCCGGACAAAAGTGCTTTACAACCCGAAGG-CCTTCTTCAC 1042 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | | ||||| |||| || ||| |||||| |||| ||||| |||||||||||| Sbjct 1043 ACACGCGGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGCCTC 1102 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 |||||||||| ||| |||||||||||| ||| ||||| | | |||||||||| Sbjct 1103 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGA 1156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068749680896