Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq783 102 2e-17 seq4361 96.9 9e-16 >seq783 Length=334 Score = 102 bits (112), Expect = 2e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| ||||| ||||||| |||||||||||||||||||||||| || | Sbjct 231 GACCGCACGGGGACGGGCACGCGCAGCGTGTTCGGCCGCCAGCTCCGCTTCGACCTCGCG 172 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 | || || |||||| | || ||||| |||| || ||| || || || ||| Sbjct 171 CAGGGCTTCCCGCTCATCACGACGAAGCGCGTGCACCTCAAGTCCGTCGCCTACGAGCTG 112 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | ||||| ||||||| |||| | |||||| |||||| || Sbjct 111 CTGTGGTTCCTGCGCGGCGACTCGAACGTGCGCTGGCTCCAGGAGCGCGGCGTGCGCATC 52 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCG 37937 ||||| |||||||| |||| ||||||| |||||||| | ||||||| Sbjct 51 TGGGACGAGTGGGCCGACGCCGACGGCGAGCTCGGCCCCGTCTACGGCG 3 >seq4361 Length=321 Score = 96.9 bits (106), Expect = 9e-16 Identities = 202/300 (67%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 38044 CGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGC---CTT 38100 ||| ||||| || | || | || || ||| |||||||||||| | |||| ||| Sbjct 7 CGCGTGGAACGTCGGGGAGATCGAGGACATGGCGCTGCCGCCGTGCC---ACGCGTTCTT 63 Query 38101 TCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATAC 38160 |||||||| || ||| |||||||| | || ||| | | |||||||| | || Sbjct 64 CCAGTTCTACGTGGCCGACGGCCGGCTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCT 123 Query 38161 GTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCA 38220 || | ||| ||||||| ||||||||| ||||||||| | || ||||| ||| Sbjct 124 CTTCCTCGGGGTGCCGTTCAACATCGCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGC 183 Query 38221 ACAATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAA 38280 || || | | || ||||| || || | | ||||| |||||||| || | ||| | Sbjct 184 GCAGACCGGCCTCGAGGTCGGCGACTTCGTGTGGACCGGAGGCGACGTGCACATCTACGA 243 Query 38281 AAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCT 38340 || || | || || | | |||||| |||||||||||| |||| |||| ||| Sbjct 244 CAACCACGTCGAGCAGGTGCGCGAGCAGCTCACGCGCGAGCCGTACCCGTACCCGACGCT 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130632696244200