Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177915.1_202017-04- 25] 4,708 sequences; 12,504,838 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq2953 149 2e-31 seq3645 91.5 4e-14 >seq2953 Length=185 Score = 149 bits (164), Expect = 2e-31 Identities = 126/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 12247 GTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAGTGG 12306 || ||||||||||| || |||||||||||||| || |||||| ||| ||||||||||| Sbjct 183 GTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGG 124 Query 12307 AAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAACGTC 12366 ||||||||||| | ||||||||||||||| | | ||||| |||||||| ||||||||| Sbjct 123 AAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTC 64 Query 12367 GCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGT 12401 || ||| || || |||| ||| |||||||| Sbjct 63 GCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGT 29 >seq3645 Length=349 Score = 91.5 bits (100), Expect = 4e-14 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 12160 GGCCATCGCATGACTGACACCCTGATCACCATCATCGGCAACCTGGTGGCGGACCCCGAG 12219 |||||| ||| | ||||||| | ||||| | ||||| ||||| || ||||| ||| Sbjct 120 GGCCATGGCAGG--TGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAG 63 Query 12220 TTGCGGTTCACGCCGGCCGGTGCTGCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGC 12279 |||| ||||| || | ||||| || || ||||||||||| || |||||||||||||| Sbjct 62 CTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGG 3 Query 12280 AC 12281 || Sbjct 2 AC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126188144741856