Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177925.1_202017-04- 25] 4,783 sequences; 12,046,303 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq3966 165 2e-38 >seq3966 Length=698 Score = 165 bits (182), Expect = 2e-38 Identities = 229/313 (73%), Gaps = 16/313 (5%) Strand=Plus/Minus Query 30 TGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTCGGTGACGGCGTGCCTTTT 87 |||| ||| | ||||||| | || |||||| | | | |||||| ||||||||||| Sbjct 698 TGAAACCGTGTTCCTACAATCCGTTGGAGCCTCCTTGGCTGGGGTGACAGCGTGCCTTTT 639 Query 88 GCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGC 147 | | ||||||||| ||||||||| ||| |||||||||| | | || | ||| Sbjct 638 GAAGAATGAGCCTGCGAGTTAGTGCTCAGTGGCGAGGTTAACC-CGTGTGG---GGAAGC 583 Query 148 CGAAGTGAAAGCGAGCCTTAACAGGGCGACGA--GTTGGTGGCGCTAGACGCGAAACCTT 205 || || ||||||||| | ||||||||| | | || | ||| |||||| |||| | Sbjct 582 CGTAGCGAAAGCGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAA 523 Query 206 GTGATCTACCCACGAGCAGGTTGAAGTCGCGG-TAA---CGCGTGATGGAGGACCGAACC 261 |||||||| ||| | ||||||||||| ||||| ||| |||||| |||||||||||| Sbjct 522 GTGATCTAGCCATGGGCAGGTTGAAG-CGCGGGTAAGACCGCGTG---GAGGACCGAACC 467 Query 262 GGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTG 321 | |||||||| | ||||||| | || |||||||||||||||||||||||| Sbjct 466 CACCAGGGTTGAAAACCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTT 407 Query 322 GGAAATAGCTCGT 334 | |||||| || Sbjct 406 CGTGATAGCTGGT 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972753470976