Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177925.1_202017-04- 25] 4,783 sequences; 12,046,303 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3966 271 2e-70 seq4634 172 1e-40 >seq3966 Length=698 Score = 271 bits (300), Expect = 2e-70 Identities = 180/197 (91%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 205 TGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGAC 264 |||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| Sbjct 38 TGCCACGGCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGAC 97 Query 265 CAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTC 324 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 98 CAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTC 157 Query 325 TACGCAACTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCT 383 | ||||||||||||||||||||||| || ||| | ||||||||||||||| | || ||| Sbjct 158 TGTGCAACTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCT 216 Query 384 GGGCTGTTTCCCTCTCG 400 ||||||||||||||||| Sbjct 217 GGGCTGTTTCCCTCTCG 233 >seq4634 Length=300 Score = 172 bits (190), Expect = 1e-40 Identities = 125/145 (86%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| ||||||||| || ||| || || Sbjct 162 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCC 103 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| | |||||||||||| ||| |||||||| ||||||||||||||| Sbjct 102 CTGGAACCCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTG 43 Query 121 CATTCTCACTCGCATCAACTCCACC 145 |||||||||||| | ||||||| Sbjct 42 CATTCTCACTCGTGTGGGCTCCACC 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177543675392