Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177925.1_202017-04- 25] 4,783 sequences; 12,046,303 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq4471 206 7e-51 seq2421 82.4 2e-13 >seq4471 Length=475 Score = 206 bits (228), Expect = 7e-51 Identities = 144/164 (88%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 31 CACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCC 90 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 266 CACGCGGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCC 325 Query 91 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 ||||||||||||| |||||||||||| |||||||||| |||| |||||||| || |||| Sbjct 326 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTA 385 Query 151 GGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 ||||||||| ||| |||||| ||||| ||||| |||| || Sbjct 386 CCCGTCGTCGCCTTGGTAGGCCATCACCCCACCAACAAGCTGAT 429 >seq2421 Length=388 Score = 82.4 bits (90), Expect = 2e-13 Identities = 117/160 (73%), Gaps = 15/160 (9%) Strand=Plus/Plus Query 260 CGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA--GGCAGTTTCC-CAGACA 316 ||||||||||| | |||||| | |||||||| ||| ||||| || | || Sbjct 1 CGGTATTAGCCCCGGTTTCCCGGAGTTATCCCGAAG--TCAAGGGCAGGTTACTCACGTG 58 Query 317 TTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTG--CTTCCTGTTACCGTTCG 374 |||||||||||| ||||||| || || |||||||||| | || | |||||| Sbjct 59 TTACTCACCCGTTCGCCACTAATCCGCC---CAGCAAGCTGGGCATCAT-----CGTTCG 110 Query 375 ACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||| || ||||||||||||| ||||| Sbjct 111 ACTTGCATGTGTTAAGCACGCCGCCAGCGTTCGTCCTGAG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222341532608