Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04- 25] 2,167 sequences; 11,642,650 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1446 224 1e-56 >seq1446 Length=1647 Score = 224 bits (248), Expect = 1e-56 Identities = 188/226 (83%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | |||||||| Sbjct 1368 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 1310 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCA-CCACCAGCTC 119 |||||||||||||||||||||||||||||| | || |||||||| || |||| | | Sbjct 1309 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCC 1250 Query 120 AACACGTCG---TTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | | || | ||||| | ||| ||||||||||||||||||||||| |||||||| Sbjct 1249 ACCGCGAGGGTGTTCACGCTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 1191 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTAC 222 ||| |||||||||||| ||| | ||| |||||||||||||||||| Sbjct 1190 CGAGTTCCTTAACCACGATTCTCTCGATCGCCTTAGTATTCTCTAC 1145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694385422591