Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04- 25] 2,167 sequences; 11,642,650 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq2060 441 3e-121 seq1446 280 5e-73 >seq2060 Length=731 Score = 441 bits (488), Expect = 3e-121 Identities = 371/466 (80%), Gaps = 44/466 (9%) Strand=Plus/Plus Query 167 AGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTC 226 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct 1 AGCTATCACGAAGTTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTC 60 Query 227 AACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATA 286 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 61 AACCCTGGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTA 120 Query 287 GATCACTTCGCTTCGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTCGCTTT 344 |||||||||||||||||||| || | || ||| || |||||| |||||||||||||| Sbjct 121 GATCACTTCGCTTCGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTTT 179 Query 345 CGCTACGGCTACCCCACACGGGTTAAC--------------------------------C 372 |||||||||| |||||||||||||||| Sbjct 180 CGCTACGGCTTCCCCACACGGGTTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 239 Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432 | | ||||||||||||||||||||||||||||||| |||||| || Sbjct 240 NNNNNNNNNNNCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACC-----CC 294 Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492 || || ||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 295 ----AGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCC 350 Query 493 CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGA 552 || || ||||||||||||||||||||||||||||||| |||||||||||||||| | | | Sbjct 351 CCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTA 410 Query 553 GTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 ||||||||||||| | |||||| ||||||||||||||| ||||| Sbjct 411 GTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTC 456 >seq1446 Length=1647 Score = 280 bits (310), Expect = 5e-73 Identities = 188/207 (91%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 10 GAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGAGTTTGGT 69 ||||||| |||||||||||||||| ||| |||| |||||| |||||||||||||||||| Sbjct 206 GAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCGGAGTTTGGC 148 Query 70 TGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCCGGGAAGAAA 128 ||| || |||| ||||| || ||| | | ||||||||| ||||||||||||| |||||| Sbjct 147 TGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCCGGCAAGAAA 88 Query 129 CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGG 188 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 87 CACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGG 28 Query 189 CCTTTCACCCCTATCCACAGGTCATCC 215 ||||||||||||| ||||||||||||| Sbjct 27 CCTTTCACCCCTAACCACAGGTCATCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817560612608