Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04-
25] 2,167 sequences; 11,642,650 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq2060 441 3e-121
seq1446 280 5e-73
>seq2060
Length=731
Score = 441 bits (488), Expect = 3e-121
Identities = 371/466 (80%), Gaps = 44/466 (9%)
Strand=Plus/Plus
Query 167 AGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTC 226
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1 AGCTATCACGAAGTTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTC 60
Query 227 AACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATA 286
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 61 AACCCTGGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTA 120
Query 287 GATCACTTCGCTTCGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTCGCTTT 344
|||||||||||||||||||| || | || ||| || |||||| ||||||||||||||
Sbjct 121 GATCACTTCGCTTCGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTTT 179
Query 345 CGCTACGGCTACCCCACACGGGTTAAC--------------------------------C 372
|||||||||| ||||||||||||||||
Sbjct 180 CGCTACGGCTTCCCCACACGGGTTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 239
Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432
| | ||||||||||||||||||||||||||||||| |||||| ||
Sbjct 240 NNNNNNNNNNNCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACC-----CC 294
Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492
|| || ||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 295 ----AGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCC 350
Query 493 CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGA 552
|| || ||||||||||||||||||||||||||||||| |||||||||||||||| | | |
Sbjct 351 CCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTA 410
Query 553 GTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598
||||||||||||| | |||||| ||||||||||||||| |||||
Sbjct 411 GTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTC 456
>seq1446
Length=1647
Score = 280 bits (310), Expect = 5e-73
Identities = 188/207 (91%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 10 GAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGAGTTTGGT 69
||||||| |||||||||||||||| ||| |||| |||||| ||||||||||||||||||
Sbjct 206 GAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCGGAGTTTGGC 148
Query 70 TGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCCGGGAAGAAA 128
||| || |||| ||||| || ||| | | ||||||||| ||||||||||||| ||||||
Sbjct 147 TGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCCGGCAAGAAA 88
Query 129 CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGG 188
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 87 CACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGG 28
Query 189 CCTTTCACCCCTATCCACAGGTCATCC 215
||||||||||||| |||||||||||||
Sbjct 27 CCTTTCACCCCTAACCACAGGTCATCC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817560612608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |