Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04-
25] 2,167 sequences; 11,642,650 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq1540 149 1e-33
>seq1540
Length=1226
Score = 149 bits (164), Expect = 1e-33
Identities = 225/334 (67%), Gaps = 44/334 (13%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||| |||||||| |||||||||||||| | | |||| | | |||||||||| |||||
Sbjct 191 CCCATGCTTTCGCTCCTCAGCGTCAGTTGCGGCCCAGAGACCTGCCTTCGCCATCGGTGT 250
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| |||||| |||||| ||||||||||| |||||||| | || || | ||||
Sbjct 251 TCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATTCCAGTCTCCCCTACCGCAC 310
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTT------------ 168
|| || | || | ||||| ||| ||||||||| |||
Sbjct 311 TCTAGTCTGCCCGTACCCGATGCAAGCTCGAGGTTGAGCCTCGAGTNNNNNNNNNNNNNN 370
Query 169 --------------------------------TCACATCTGACTTGCCTTCCCGCCTACA 196
||||| | ||| | | ||||||||
Sbjct 371 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACACCAGACGCGACAAACCGCCTACG 430
Query 197 CGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCT 256
|| |||||| |||||||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct 431 AGCTCTTTACGCCCAATAATTCCGGACAACGCTTGCGCCCTACGTATTACCGCGGCTGCT 490
Query 257 GGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| |||| ||| ||||||
Sbjct 491 GGCACGTAGTTAGCCGGCGCTTCTTCTGCAGGTA 524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828782601157
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |