Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04- 25] 2,167 sequences; 11,642,650 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1540 279 1e-72 >seq1540 Length=1226 Score = 279 bits (308), Expect = 1e-72 Identities = 330/456 (72%), Gaps = 51/456 (11%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| || || ||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 524 TACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGC 465 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 |||||| |||||||||| ||||||||||| | |||||| ||||| | ||| | || Sbjct 464 AAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGTTTGTCGCGTCTGGTGT 405 Query 121 GAA---------------------------------------------AGGCTATGGCTC 135 || | | | ||||| Sbjct 404 GANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCGA-GGCTC 346 Query 136 AACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCC 195 |||| || | ||| | | || | | ||||||||| | ||||| | ||||||||| Sbjct 345 AACCTCGAGCTTGCATCGGGTACGGGCAGACTAGAGTGCGGTAGGGGAGACTGGAATTCC 286 Query 196 TAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCT 255 | ||||||||||| |||||| |||||| |||||||||||| |||||||||| | | || Sbjct 285 TGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGGTCTCT 226 Query 256 GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGG 315 || | | ||||||| |||||| ||||||| |||||||| |||||||||||||||||||| Sbjct 225 GGGCCGCAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGATTAGATACCCTGG 166 Query 316 TAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT---AAGTGCTCCGGTGC 372 ||||||| |||||||||| || ||||||||| ||||| ||| | | | ||| |||| Sbjct 165 TAGTCCATGCCGTAAACGTTGGGCACTAGGTGT-GGGGCTCATTCCACGAGTTCC-GTGC 108 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||||||||||||| ||||| || ||||||||||| Sbjct 107 CGCAGCAAACGCATTAAGTGCCCCGCCTGGGGAGTA 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203173926656