Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177935.1_202017-04- 25] 2,167 sequences; 11,642,650 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq852 728 0.0 seq1353 141 3e-31 seq362 89.7 2e-15 >seq852 Length=7297 Score = 728 bits (806), Expect = 0.0 Identities = 468/504 (93%), Gaps = 9/504 (2%) Strand=Plus/Minus Query 44 CCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACC 103 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 7297 CCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACC 7238 Query 104 TGACAATGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTC 160 |||||||||| |||||||||||| |||| |||| ||||||| || || |||| ||| Sbjct 7237 TGACAATGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAA 7179 Query 161 GGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTC 220 |||| |||| ||||||||||||| |||||||| |||| |||| |||||||||||||| Sbjct 7178 AATGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTC 7119 Query 221 ACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGG 279 ||| |||||||| |||||||||||||||||||| ||| | ||| ||||||| ||| Sbjct 7118 ACTGGCGCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAA 7063 Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 7062 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTT 7003 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7002 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 6943 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6942 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 6883 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6882 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 6823 Query 520 ACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||| Sbjct 6822 ACATTGCGTCAACATCACTTTCTG 6799 >seq1353 Length=635 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 545 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 604 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 605 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 635 >seq362 Length=22573 Score = 89.7 bits (98), Expect = 2e-15 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 44 CCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||| || Sbjct 22573 CCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 22517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635164565216