Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq20204 105 1e-20 >seq20204 Length=3250 Score = 105 bits (116), Expect = 1e-20 Identities = 132/177 (75%), Gaps = 7/177 (4%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | |||||||| | || |||||| Sbjct 676 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 734 Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 | | | |||||| |||||||||||| | ||||||||| ||||||||| ||| Sbjct 735 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 794 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCG 175 |||||||||| | | || | ||||| || ||||||||| | ||||||||| Sbjct 795 GCGAGGTTAA-CCCGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCG 847 Score = 91.5 bits (100), Expect = 3e-16 Identities = 110/146 (75%), Gaps = 8/146 (5%) Strand=Plus/Plus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC-GGTAA---CGCGTGAT 248 ||| |||| | |||||||| ||| | ||||||||||| ||| ||||| |||| | Sbjct 901 GACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCGGGTAAGACCGCG---T 956 Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308 ||||||||||||| | |||||||| | ||||||| | || |||||||||||| Sbjct 957 GGAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTGTGGTTAGGGGTGAAAG 1016 Query 309 GCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||| | |||||| || Sbjct 1017 GCCAATCAAACTTCGTGATAGCTGGT 1042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972556819456