Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq20204 257 2e-66 >seq20204 Length=3250 Score = 257 bits (284), Expect = 2e-66 Identities = 211/252 (84%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | |||||||| Sbjct 2204 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 2146 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCA-CCACCAGCTC 119 |||||||||||||||||||||||||||||| | || |||||||| || |||| | | Sbjct 2145 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCC 2086 Query 120 AACACGTCG---TTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | | || | ||||| | ||| ||||||||||||||||||||||| |||||||| Sbjct 2085 ACCGCGAGGGTGTTCACGCTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 2027 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 ||| |||||||||||| ||| | ||| ||||||||||||||||||||||||||||| || Sbjct 2026 CGAGTTCCTTAACCACGATTCTCTCGATCGCCTTAGTATTCTCTACCTGACCACCTGAGT 1967 Query 237 CGGTTTACGGTA 248 |||||| |||| Sbjct 1966 CGGTTTGGGGTA 1955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694231838454