Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177945.1_202017-04- 26] 24,998 sequences; 12,874,792 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq20204 428 2e-117 >seq20204 Length=3250 Score = 428 bits (474), Expect = 2e-117 Identities = 280/306 (92%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 |||||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||| Sbjct 1205 TCGACTACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCG 1147 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | | ||||||||| ||||||||||| Sbjct 1146 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 1087 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1086 GGCAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 1027 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct 1026 TTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTCAACCCTGGTGGGT 967 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 966 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTAGATCACTTCGCTT 907 Query 300 CGGGTC 305 |||||| Sbjct 906 CGGGTC 901 Score = 324 bits (358), Expect = 5e-86 Identities = 237/275 (86%), Gaps = 9/275 (3%) Strand=Plus/Minus Query 324 CGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAA 383 |||||| |||||||||||||||||||||||| ||||||||||||||||||||| || | Sbjct 847 CGCCCTGTTCGGACTCGCTTTCGCTACGGCTTCCCCACACGGGTTAACCTCGCCACTGAG 788 Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACT 443 | | ||||||||||||||||||||||||||||||| |||||| || || || Sbjct 787 CACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACC-----CC----AGCCAAG 737 Query 444 TCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGT 503 ||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct 736 GAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGT 677 Query 504 ACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCT 563 |||||||||||||||||||||||||| |||||||||||||||| | | |||||||||||| Sbjct 676 ACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGGCT 617 Query 564 TAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 || | |||||| ||||||||||||||| ||||| Sbjct 616 TAGCAAGTGGTCTTGCCAGATTCACACGAGATTTC 582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817145636352