Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq66 738 0.0 seq7 116 1e-23 seq114 95.1 4e-17 >seq66 Length=2738 Score = 738 bits (818), Expect = 0.0 Identities = 475/512 (93%), Gaps = 9/512 (2%) Strand=Plus/Plus Query 36 CATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAAC 95 |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 1 CATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAAC 60 Query 96 TCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGA 152 |||||||||||||||||| |||||||||||| |||| |||| ||||||| || || ||| Sbjct 61 TCCCCACCTGACAATGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGA 119 Query 153 AAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGT 212 | ||| |||| |||| ||||||||||||| |||||||| |||| |||| |||||| Sbjct 120 ACGTGGAAAATGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGT 179 Query 213 GGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA-CCTCTCAAGTCATTTCAC 271 ||||||||||| |||||||| |||||||||||||||||| ||||| | ||| ||||| Sbjct 180 GGTATTTCACTGGCGCCGAA---GCTCCCACTTATTCTACACCCTCT-ATGTCTCTTCAC 235 Query 272 AAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331 || ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 236 AATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCC 295 Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 296 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 355 Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 415 Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 416 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 475 Query 512 CAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||| Sbjct 476 CAGAAATCACATTGCGTCAACATCACTTTCTG 507 >seq7 Length=1017 Score = 116 bits (128), Expect = 1e-23 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 941 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 1000 Query 67 GTTTAACAGATGTGCCG 83 ||||||||||||||||| Sbjct 1001 GTTTAACAGATGTGCCG 1017 >seq114 Length=22662 Score = 95.1 bits (104), Expect = 4e-17 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 36 CATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAAC 95 |||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 1 CATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGTCCCAGCCAAAC 60 Query 96 TCCCC 100 || || Sbjct 61 TCTCC 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635084309600