Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177975.1_202017-04- 25] 7,075 sequences; 12,875,875 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq6882 86.0 2e-12 seq4644 80.6 7e-11 >seq6882 Length=157 Score = 86.0 bits (94), Expect = 2e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 37820 TATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGC 37879 || || ||||| ||||| | ||||| ||||||| |||| | |||||| ||| Sbjct 142 TACGAGCTGCTGTGGTTCCTGCGCGGCGACTCGAACGTGCGCTGGCTCCAGGAGCGCGGC 83 Query 37880 GTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCG 37939 ||| || ||||| |||||||| |||| ||||||| |||||||| | ||||||| Sbjct 82 GTGCGCATCTGGGACGAGTGGGCCGACGCCGACGGCGAGCTCGGCCCCGTCTACGGCGTC 23 Query 37940 CAATGGCGCTCGTGG 37954 || |||||||||||| Sbjct 22 CAGTGGCGCTCGTGG 8 >seq4644 Length=328 Score = 80.6 bits (88), Expect = 7e-11 Identities = 157/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 38044 CGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGC---CTT 38100 ||| ||||| || | || | || || ||| |||||||||||| | |||| ||| Sbjct 265 CGCGTGGAACGTCGGGGAGATCGAGGACATGGCGCTGCCGCCGTGCC---ACGCGTTCTT 209 Query 38101 TCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATAC 38160 |||||||| || ||| |||||||| | || ||| | | |||||||| | || Sbjct 208 CCAGTTCTACGTGGCCGACGGCCGGCTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCT 149 Query 38161 GTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCA 38220 || | ||| ||||||| ||||||||| ||||||||| | || ||||| ||| Sbjct 148 CTTCCTCGGGGTGCCGTTCAACATCGCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGC 89 Query 38221 ACAATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCA 38271 || || | | || ||||| || || | | ||||| |||||||| || Sbjct 88 GCAGACCGGCCTCGAGGTCGGCGACTTCGTGTGGACCGGAGGCGACGTGCA 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130629024198750