Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177985.1_202017-04- 25] 2,056 sequences; 11,515,417 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq971 120 1e-24 seq84 75.2 4e-11 >seq971 Length=294 Score = 120 bits (132), Expect = 1e-24 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 78 GGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGG 137 ||||| || | |||||| |||||||||| | |||||||| | |||||||| |||||| Sbjct 291 GGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTGTGG 232 Query 138 GTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGG 197 |||||||||||||| || ||||||| | ||||||||||||| |||||| ||||||| Sbjct 231 TTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTCTCCCCGAAATGCATTTAGG 172 Query 198 T 198 | Sbjct 171 T 171 >seq84 Length=187 Score = 75.2 bits (82), Expect = 4e-11 Identities = 96/130 (74%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 351 CCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGC 410 || ||| | | ||||||||||| || | ||||||| | || || || |||| Sbjct 175 CCAGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGC 118 Query 411 TAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTC 470 ||||| | |||| |||||||| |||||||||| | || ||||||||||||| ||||| Sbjct 117 ACAGACAACCAGGAGGTTGGCTTAGAAGCAGCCACCC-TTGAAAGAGTGCGTAATAGCTC 59 Query 471 ACTAGTCGAG 480 ||| ||| || Sbjct 58 ACTGGTCAAG 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689565261824