Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq3068 197 3e-48
seq4278 113 9e-23
>seq3068
Length=5922
Score = 197 bits (218), Expect = 3e-48
Identities = 241/325 (74%), Gaps = 9/325 (3%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| |||| || ||||| | ||||||||| || | |
Sbjct 2873 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAACAGTCGGAGCCTCGTAAGG-G 2815
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-CACCAGCGAGGTTAAG 129
|||||||||| ||||||| |||||| | | ||| ||| ||| || ||| || ||||
Sbjct 2814 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA--CGTTCAGTAGCAAGCTTAAC 2757
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
| | ||| || || || ||||||||| | || |||||| ||||| |||
Sbjct 2756 CGTATAGGGC-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTTGCTGGGC 2702
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
||||| ||||||| |||||||| ||| | |||| ||||| |||||||| ||| ||
Sbjct 2701 GTAGACCCGAAACCAGGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGTACTG 2642
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| ||||||| |||||||||||||| |||||| | || |||||||||||||
Sbjct 2641 GAGGTCCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 2582
Query 310 CCAATCAAACTGGGAAATAGCTCGT 334
| || ||||| |||||||||| ||
Sbjct 2581 CTAAACAAACCTGGAAATAGCTGGT 2557
>seq4278
Length=221
Score = 113 bits (124), Expect = 9e-23
Identities = 154/210 (73%), Gaps = 9/210 (4%)
Strand=Plus/Plus
Query 32 AACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTCGGTGACGGCGTGCCTTTTGC 89
|| ||| | |||||||| | || |||||| | | | |||||| ||||||||||||
Sbjct 1 AAACCGTGTGCCTACAATCCGTTGGAGCCTCCTTGGCTGGGGTGACAGCGTGCCTTTTGA 60
Query 90 ATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCG 149
| ||||||||| ||||||||| ||| |||||||||| | | || | |||||
Sbjct 61 AGAATGAGCCTGCGAGTTAGTGCTCAGTGGCGAGGTTAA-CCCGTGTGG---GGAAGCCG 116
Query 150 AAGTGAAAGCGAGCCTTAACAGGGCGAC--GAGTTGGTGGCGCTAGACGCGAAACCTTGT 207
|| ||||||||| | ||||||||| | ||| | ||| |||||| |||| | ||
Sbjct 117 TAGCGAAAGCGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGT 176
Query 208 GATCTACCCACGAGCAGGTTGAAGTCGCGG 237
|||||| ||| | ||||||||||| |||||
Sbjct 177 GATCTAGCCATGGGCAGGTTGAAG-CGCGG 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972729082880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |