Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq3068 197 3e-48 seq4278 113 9e-23 >seq3068 Length=5922 Score = 197 bits (218), Expect = 3e-48 Identities = 241/325 (74%), Gaps = 9/325 (3%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||| | ||||||||| || | | Sbjct 2873 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAACAGTCGGAGCCTCGTAAGG-G 2815 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-CACCAGCGAGGTTAAG 129 |||||||||| ||||||| |||||| | | ||| ||| ||| || ||| || |||| Sbjct 2814 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA--CGTTCAGTAGCAAGCTTAAC 2757 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | ||| || || || ||||||||| | || |||||| ||||| ||| Sbjct 2756 CGTATAGGGC-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTTGCTGGGC 2702 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| ||| | |||| ||||| |||||||| ||| || Sbjct 2701 GTAGACCCGAAACCAGGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGTACTG 2642 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| |||||||||||||| |||||| | || ||||||||||||| Sbjct 2641 GAGGTCCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 2582 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | || ||||| |||||||||| || Sbjct 2581 CTAAACAAACCTGGAAATAGCTGGT 2557 >seq4278 Length=221 Score = 113 bits (124), Expect = 9e-23 Identities = 154/210 (73%), Gaps = 9/210 (4%) Strand=Plus/Plus Query 32 AACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTCGGTGACGGCGTGCCTTTTGC 89 || ||| | |||||||| | || |||||| | | | |||||| |||||||||||| Sbjct 1 AAACCGTGTGCCTACAATCCGTTGGAGCCTCCTTGGCTGGGGTGACAGCGTGCCTTTTGA 60 Query 90 ATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCG 149 | ||||||||| ||||||||| ||| |||||||||| | | || | ||||| Sbjct 61 AGAATGAGCCTGCGAGTTAGTGCTCAGTGGCGAGGTTAA-CCCGTGTGG---GGAAGCCG 116 Query 150 AAGTGAAAGCGAGCCTTAACAGGGCGAC--GAGTTGGTGGCGCTAGACGCGAAACCTTGT 207 || ||||||||| | ||||||||| | ||| | ||| |||||| |||| | || Sbjct 117 TAGCGAAAGCGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGT 176 Query 208 GATCTACCCACGAGCAGGTTGAAGTCGCGG 237 |||||| ||| | ||||||||||| ||||| Sbjct 177 GATCTAGCCATGGGCAGGTTGAAG-CGCGG 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972729082880