Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq3068 609 6e-172
seq1465 161 3e-37
>seq3068
Length=5922
Score = 609 bits (674), Expect = 6e-172
Identities = 379/407 (93%), Gaps = 0/407 (0%)
Strand=Plus/Minus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5052 TACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 4993
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
|||||||||||||||||||||||||||||||||||||||||||| |||||| | |||
Sbjct 4992 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAGACCGATGT 4933
Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182
|||||||||||||| |||||||||| |||||| ||||||| | ||||||| || ||||
Sbjct 4932 GAAATCCCCGGGCTCAACCTGGGAACTGCATTGGTGACTGGCAGGCTAGAGTATGGCAGA 4873
Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242
||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct 4872 GGGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGG 4813
Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 4812 CGAAGGCAGCCCCCTGGGCCAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 4753
Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct 4752 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGGATTCATT 4693
Query 363 TCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 4692 TCCTTAGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTAC 4646
>seq1465
Length=221
Score = 161 bits (178), Expect = 3e-37
Identities = 170/222 (77%), Gaps = 9/222 (4%)
Strand=Plus/Plus
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
|||||||| ||||||| ||| |||||| |||||| ||||||||||| |||||||||||
Sbjct 1 GGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGC 60
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
|| | ||||| ||||||||| | | ||||||| |||||||| ||||||||||||
Sbjct 61 AGGTCTCTGGGCCGCAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGATTAGA 120
Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG--GATT----TACTT 363
||||||||||||||| ||| |||||| | ||||| ||| ||| ||| | ||
Sbjct 121 TACCCTGGTAGTCCATGCCGTAAACGTTGGGCACTAGGTGTGGGGCTCATTCCACGAGTT 180
Query 364 CCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGA 405
|| || || ||| ||||| | |||| |||||||||||
Sbjct 181 CC---GTGCCGCAGCAAACGCATTAAGTGCCCCGCCTGGGGA 219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289505988160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |