Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3068 609 6e-172 seq1465 161 3e-37 >seq3068 Length=5922 Score = 609 bits (674), Expect = 6e-172 Identities = 379/407 (93%), Gaps = 0/407 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5052 TACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 4993 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct 4992 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAGACCGATGT 4933 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||||||||||| |||||||||| |||||| ||||||| | ||||||| || |||| Sbjct 4932 GAAATCCCCGGGCTCAACCTGGGAACTGCATTGGTGACTGGCAGGCTAGAGTATGGCAGA 4873 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| |||| Sbjct 4872 GGGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGG 4813 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 4812 CGAAGGCAGCCCCCTGGGCCAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 4753 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | | Sbjct 4752 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGGATTCATT 4693 Query 363 TCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 4692 TCCTTAGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTAC 4646 >seq1465 Length=221 Score = 161 bits (178), Expect = 3e-37 Identities = 170/222 (77%), Gaps = 9/222 (4%) Strand=Plus/Plus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| ||||||| ||| |||||| |||||| ||||||||||| ||||||||||| Sbjct 1 GGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGC 60 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || | ||||| ||||||||| | | ||||||| |||||||| |||||||||||| Sbjct 61 AGGTCTCTGGGCCGCAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGATTAGA 120 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG--GATT----TACTT 363 ||||||||||||||| ||| |||||| | ||||| ||| ||| ||| | || Sbjct 121 TACCCTGGTAGTCCATGCCGTAAACGTTGGGCACTAGGTGTGGGGCTCATTCCACGAGTT 180 Query 364 CCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGA 405 || || || ||| ||||| | |||| ||||||||||| Sbjct 181 CC---GTGCCGCAGCAAACGCATTAAGTGCCCCGCCTGGGGA 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289505988160