Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq4319 174 2e-41
seq3068 116 5e-24
>seq4319
Length=186
Score = 174 bits (192), Expect = 2e-41
Identities = 151/183 (83%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| |||||||||||||||||||||||||||||| ||| | | ||||||||
Sbjct 183 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 125
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACC-ACCACCAGCTC 119
|||||||||||||||||||||||||||||| | || |||||||| || |||| | |
Sbjct 124 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCC 65
Query 120 AAC---ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176
| | | | |||||| | ||| ||||||||||||||||||||||| ||||||||
Sbjct 64 ACCGCGAGGGTGTTCACGCTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 6
Query 177 CGA 179
|||
Sbjct 5 CGA 3
>seq3068
Length=5922
Score = 116 bits (128), Expect = 5e-24
Identities = 177/249 (71%), Gaps = 10/249 (4%)
Strand=Plus/Plus
Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66
||||| |||||||||||||||| || ||||| || |||| | || || ||| | ||
Sbjct 1528 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 1586
Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCAC--CACCA-----GCTC 119
||||||||| ||||||||||| || | || ||| ||| | |||| || |
Sbjct 1587 GTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACCCCTTCACCCTTCTGGCGC 1646
Query 120 AACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179
|| | || | | || ||| |||| |||||||||||||| ||| ||||||||
Sbjct 1647 AAGCCA--GTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTACGGTACCAATTTGCCGA 1704
Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239
|||||| || ||||| | | | |||||||| || ||| | | |||||||||||||
Sbjct 1705 GTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCCCACCTGTGTCGG 1764
Query 240 TTTACGGTA 248
||| |||||
Sbjct 1765 TTTGCGGTA 1773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694350960170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |