Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq4319 174 2e-41 seq3068 116 5e-24 >seq4319 Length=186 Score = 174 bits (192), Expect = 2e-41 Identities = 151/183 (83%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | |||||||| Sbjct 183 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 125 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACC-ACCACCAGCTC 119 |||||||||||||||||||||||||||||| | || |||||||| || |||| | | Sbjct 124 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCC 65 Query 120 AAC---ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | | | | |||||| | ||| ||||||||||||||||||||||| |||||||| Sbjct 64 ACCGCGAGGGTGTTCACGCTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 6 Query 177 CGA 179 ||| Sbjct 5 CGA 3 >seq3068 Length=5922 Score = 116 bits (128), Expect = 5e-24 Identities = 177/249 (71%), Gaps = 10/249 (4%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 ||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 1528 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 1586 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCAC--CACCA-----GCTC 119 ||||||||| ||||||||||| || | || ||| ||| | |||| || | Sbjct 1587 GTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACCCCTTCACCCTTCTGGCGC 1646 Query 120 AACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 || | || | | || ||| |||| |||||||||||||| ||| |||||||| Sbjct 1647 AAGCCA--GTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTACGGTACCAATTTGCCGA 1704 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| || ||||| | | | |||||||| || ||| | | ||||||||||||| Sbjct 1705 GTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCCCACCTGTGTCGG 1764 Query 240 TTTACGGTA 248 ||| ||||| Sbjct 1765 TTTGCGGTA 1773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694350960170