Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq3068 448 1e-123 seq4319 109 1e-21 >seq3068 Length=5922 Score = 448 bits (496), Expect = 1e-123 Identities = 352/417 (84%), Gaps = 12/417 (3%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||| ||||| | ||||| ||| |||||||||||| |||||||| Sbjct 1338 CGCGGGTAGATTGCATCATCACAAACACTTCAACTTCGCTGAGTCTCGGGAGGAGACAGT 1397 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1398 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1457 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||| |||| ||||||||||| || Sbjct 1458 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGACTTCAATCAAGAGCTT-GC---- 1512 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1513 ----ACCCCATCATTTAATCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 1568 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||||||||||||||||||||||||||| |||||||||||||| || || | || | | Sbjct 1569 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACC-AGTTTATTGCAAC 1627 Query 301 GGCATGA-GCTTACGGAGCAAGTCCTTCACCCT-CACCGGCGCACCTTCTCCCGAAGTTA 358 | | | ||| || ||||| | ||| || || |||| ||||| ||||||||||| Sbjct 1628 CCCTTCACCCTTCTGGCGCAAGCCAGTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTA 1687 Query 359 CGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||| || |||||| ||||||||| |||||||||||||||||||||| | || ||| Sbjct 1688 CGGTACCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTC 1744 >seq4319 Length=186 Score = 109 bits (120), Expect = 1e-21 Identities = 137/184 (74%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 |||||||||| ||||||||||||||||| || ||||| || ||| || || ||| | Sbjct 182 TTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCGCACGG 123 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCG-GCATGAGCTTAC 313 ||||||||||| ||||||||||| | |||||| ||| || ||| || | | || Sbjct 122 ACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCCAC 63 Query 314 GGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCC 373 | | | | ||||| || | ||| | ||||||||||||||||||| | | ||||||| Sbjct 62 CGCG-AGGGTGTTCACGCT-TCGGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCC 5 Query 374 TAGT 377 ||| Sbjct 4 GAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260708087680