Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq3068 448 1e-123
seq4319 109 1e-21
>seq3068
Length=5922
Score = 448 bits (496), Expect = 1e-123
Identities = 352/417 (84%), Gaps = 12/417 (3%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| || | |||||| ||||| | ||||| ||| |||||||||||| ||||||||
Sbjct 1338 CGCGGGTAGATTGCATCATCACAAACACTTCAACTTCGCTGAGTCTCGGGAGGAGACAGT 1397
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1457
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||
Sbjct 1458 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGACTTCAATCAAGAGCTT-GC---- 1512
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1513 ----ACCCCATCATTTAATCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 1568
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
||||||||||||||||||||||||||| |||||||||||||| || || | || | |
Sbjct 1569 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACC-AGTTTATTGCAAC 1627
Query 301 GGCATGA-GCTTACGGAGCAAGTCCTTCACCCT-CACCGGCGCACCTTCTCCCGAAGTTA 358
| | | ||| || ||||| | ||| || || |||| ||||| |||||||||||
Sbjct 1628 CCCTTCACCCTTCTGGCGCAAGCCAGTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTA 1687
Query 359 CGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||| || |||||| ||||||||| |||||||||||||||||||||| | || |||
Sbjct 1688 CGGTACCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTC 1744
>seq4319
Length=186
Score = 109 bits (120), Expect = 1e-21
Identities = 137/184 (74%), Gaps = 3/184 (2%)
Strand=Plus/Minus
Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254
|||||||||| ||||||||||||||||| || ||||| || ||| || || ||| |
Sbjct 182 TTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCGCACGG 123
Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCG-GCATGAGCTTAC 313
||||||||||| ||||||||||| | |||||| ||| || ||| || | | ||
Sbjct 122 ACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCCAC 63
Query 314 GGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCC 373
| | | | ||||| || | ||| | ||||||||||||||||||| | | |||||||
Sbjct 62 CGCG-AGGGTGTTCACGCT-TCGGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCC 5
Query 374 TAGT 377
|||
Sbjct 4 GAGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260708087680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |