Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq3068 457 3e-126 seq1466 248 3e-63 seq6180 134 4e-29 >seq3068 Length=5922 Score = 457 bits (506), Expect = 3e-126 Identities = 402/497 (81%), Gaps = 7/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct 4648 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 4589 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGAC-CCCT 119 |||| ||||||||| |||||||||| ||||||||| | |||||||| || || ||| Sbjct 4588 GTGGATTAATTCGATGCAACGCGAAAAACCTTACCTACCCTTGACATGGTCGGAATCCCG 4529 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 || |||| || | | | | | || | ||||||| ||||||| |||||||| Sbjct 4528 CT-GAGAGGTGGGAGTGCTCGAAAGAGAACCGGCGCACAGGTGCTGCATGGCTGTCGTCA 4470 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 4469 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCTTAGTTG 4410 Query 240 CCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 299 | | ||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 4409 CTACGC--AAGA---GCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 4355 Query 300 CGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATA 359 |||||||| || ||||| |||||||| | ||||| ||||||| |||||||| | | Sbjct 4354 TGACGTCAAGTCCTCATGGCCCTTATGGGTAGGGCTTCACACGTCATACAATGGTCGGAA 4295 Query 360 CAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATT 419 || |||| || || |||||||| ||| ||||||| ||| | || ||| |||||| Sbjct 4294 CAGAGGGTTGCCAACCCGCGAGGGGGAGCTAATCCCAGAAAACCGATCGTAGTCCGGATT 4235 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 | | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| Sbjct 4234 GCACTCTGCAACTCGAGTGCATGAAGCTGGAATCGCTAGTAATCGCGGATCAGCATGCCG 4175 Query 480 CGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 4174 CGGTGAATACGTTCCCG 4158 >seq1466 Length=271 Score = 248 bits (274), Expect = 3e-63 Identities = 195/228 (86%), Gaps = 9/228 (4%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| | |||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 222 TACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCAT 163 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTC-TGACCCCT 119 | || ||||||||| |||||||||||||||||||||| |||||||| | | || || Sbjct 162 GCGGATTAATTCGATGCAACGCGAAGAACCTTACCAAGGCTTGACATGCACGAGAAGCCA 103 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACA-GAGTG-ACAGGTGATGCATGGTTGTCGT 177 | |||||| | ||| | ||| ||||| ||| ||||||| |||||||||||||| Sbjct 102 CCAGAGATGGTGGT---CTCTT---TGGACACTCGTGCACAGGTGGTGCATGGTTGTCGT 49 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACC 225 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 48 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACC 1 >seq6180 Length=170 Score = 134 bits (148), Expect = 4e-29 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct 51 GACTGCCGGGGTCAACTCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATG 110 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGT 383 ||||||| ||| | ||||||||||| | |||||||||| |||| |||| |||| Sbjct 111 TCTTGGGCTTCACGCATGCTACAATGGCCGGTACAAAGGGCTGCGATACCGTAAGGT 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503890358400