Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq3068 356 8e-96
seq3302 300 6e-79
seq4278 248 3e-63
seq703 201 4e-49
>seq3068
Length=5922
Score = 356 bits (394), Expect = 8e-96
Identities = 418/554 (75%), Gaps = 26/554 (5%)
Strand=Plus/Plus
Query 52 CGGCATTCGGAGTTTGGTTGATTTCGG--TAAGCTTG--TGGGCCCCCTAGACCATC-CA 106
||| |||||||||||| | || ||| ||| || | | ||||| | ||||| ||
Sbjct 2444 CGGTATTCGGAGTTTGCT--ATGGCGGGGTAATCTGCAATAGACCCCCCA-ACCATGACA 2500
Query 107 GTGCTCTACCTCCGG-GAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAAC 165
|||||||||| ||| | || ||||| | | || |||||||| |||||| ||||||
Sbjct 2501 GTGCTCTACCCCCGAAGGTGAGACACGAGGCACT--ACCTAAATAGTTTTCGGAGAGAAC 2558
Query 166 CAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT 225
||||||| | | ||||| || ||||||||||||||||||||| ||||||||| | ||||
Sbjct 2559 CAGCTATTTCCAGGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCCCTAACTTTT 2618
Query 226 CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGAT 285
|||| | ||||||||||| |||||| || ||||| ||||| |||| ||||||||
Sbjct 2619 CAACGTTAGTGGGTTCGGACCTCCAGTACGTGTTACCGCACCTTCATCCTGGCCATGGAT 2678
Query 286 AGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTC 345
||||||| | | ||||||||| | || ||| | |||||||||||||||||||||||
Sbjct 2679 AGATCACCTGGTTTCGGGTCTACGCCCAGCAACTGA-ACGCCCTATTCGGACTCGCTTTC 2737
Query 346 GCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCT 405
|||||| || ||| | || |||||| || || || |||| || |||| | | |||| |
Sbjct 2738 GCTACGCCTGCCCTATAC-GGTTAAGCTTGCTACTGAACG-TAAGTCGCTGACCCATTAT 2795
Query 406 TCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC 465
||||||| ||||||||||| | || || |||||||| | ||||| ||
Sbjct 2796 ACAAAAGGTACGCCGTCACC----CCTTACGAG--------GCTCCGACTGTTTGTATGC 2843
Query 466 ACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGG 525
| ||||||||| |||||||||||||| || ||||| |||||| ||||||||||||||
Sbjct 2844 ATGCGGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGG 2903
Query 526 TACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATT 585
|||| || | ||||||||| | |||||||||| ||| || ||||||| ||| ||
Sbjct 2904 TACTGGTTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTT 2963
Query 586 CACACGAAATTTCA 599
|| || ||||||
Sbjct 2964 CAGACAGGATTTCA 2977
>seq3302
Length=226
Score = 300 bits (332), Expect = 6e-79
Identities = 203/226 (90%), Gaps = 1/226 (0%)
Strand=Plus/Minus
Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62
|||||||||||||| ||||||||||||||| ||| |||| |||||| ||||||||||||
Sbjct 226 GACTACGGAGCTTATCCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCGGA 167
Query 63 GTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCCGG 121
|||||| ||| || |||| ||||| || ||| | | ||||||||| |||||||||||||
Sbjct 166 GTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCCGG 107
Query 122 GAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTT 181
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 106 CAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTT 47
Query 182 TGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227
|||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 46 TGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTCA 1
>seq4278
Length=221
Score = 248 bits (274), Expect = 3e-63
Identities = 195/231 (84%), Gaps = 12/231 (5%)
Strand=Plus/Minus
Query 246 CTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 221 CTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTAGATCACTTCGCTTCGGGTC 162
Query 306 TTGATCGTGCCACTCATA--CGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACAC 363
| || | || ||| || |||||| |||||||||||||||||||||||| ||||||||
Sbjct 161 TAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTTTCGCTACGGCTTCCCCACAC 103
Query 364 GGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCA 423
||||||||||||| || | | | ||||||||||||||||||||||||||||||| ||||
Sbjct 102 GGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCA 43
Query 424 CCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTT 474
|| || || || ||||| |||||||||||||||| |||||
Sbjct 42 CC-----CC----AGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTT 1
>seq703
Length=214
Score = 201 bits (222), Expect = 4e-49
Identities = 131/144 (91%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 455 GGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCT 514
|||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1 GGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCT 60
Query 515 TTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGT 574
||||||||||||||| |||||||||||||||| | | |||||||||||||| | |||||
Sbjct 61 TTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGT 120
Query 575 CCCGCCAGATTCACACGAAATTTC 598
| ||||||||||||||| |||||
Sbjct 121 CTTGCCAGATTCACACGAGATTTC 144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817467496960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |