Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq3068 430 3e-118 seq703 149 2e-33 seq4278 116 9e-24 >seq3068 Length=5922 Score = 430 bits (476), Expect = 3e-118 Identities = 353/415 (85%), Gaps = 12/415 (3%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| || ||||||||| ||||| |||| ||||||| |||||||| | Sbjct 2591 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGACCTCCAGTACG 2648 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| | Sbjct 2649 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACG-C 2703 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||| ||| |||||||| | |||||||||| |||||||||| |||||| |||||||| Sbjct 2704 CCAGCAACTGAACGCCCTATTCGGACTCGCTTT-CGCTACGCCTGCCCTATACGGTTAAG 2762 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| || |||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct 2763 CTT-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC--CTT 2819 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | |||||| |||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 2820 ACGAGGCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 2878 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| Sbjct 2879 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAG 2938 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||||||||||||||| |||||||| |||| |||| ||| |||||| Sbjct 2939 CCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTCACGTGTCCCGCCCTACT 2993 >seq703 Length=214 Score = 149 bits (164), Expect = 2e-33 Identities = 129/159 (81%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 260 TTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTT 319 ||||| ||| ||||||||||| |||||||||||||||| ||||||| |||||| ||||| Sbjct 4 TTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCACCTTT 62 Query 320 CCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||||||||||||| || | |||||||||| | ||||||||||| ||| | ||||| Sbjct 63 CCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCT 122 Query 380 CCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||| ||||| || | ||||||| || |||| ||||| Sbjct 123 TGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 161 >seq4278 Length=221 Score = 116 bits (128), Expect = 9e-24 Identities = 153/203 (75%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 78 TTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTA--GA 135 |||||||||||||| || |||||| | | |||||||||| ||||||||||| | Sbjct 199 TTCAACCTGCCCAT-GGCTAGATCACTTCG-CTTCGGGTCTA-GACCCAGCGACTATGGG 143 Query 136 CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGA 195 |||||| | ||||||| |||||||||| || ||| | ||| | | | | |||||||| Sbjct 142 CGCCCTGTTCGGACTCGC-TTTCGCTACGGCTTCCCCACACGGGTTAACCTCGCCACTGA 84 Query 196 -AAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA-CCCAACAAAGTGGGCTCC 253 | ||| |||| | | |||| | ||||||| |||| |||| |||| | ||| |||||| Sbjct 83 GCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAAGGAGGCTCC 24 Query 254 CACTGCTTGTACGCATACGGTTT 276 || | ||||| ||| ||||||| Sbjct 23 AACGGATTGTAGGCACACGGTTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241509487360