Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3068 168 2e-39 seq3435 140 8e-31 >seq3068 Length=5922 Score = 168 bits (186), Expect = 2e-39 Identities = 285/406 (70%), Gaps = 19/406 (5%) Strand=Plus/Plus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||||| || || ||| | | | Sbjct 1997 CTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 2056 Query 64 GAACCCTTGGATAATCGGCGGACGGGA--TTCCCACCCGTCACACGCTACTCATGCCTGC 121 ||| |||||| ||||| ||| ||| | ||| | | ||||||||||| | || Sbjct 2057 GAAACCTTGGGCTTACGGCGAGGGGGCCTTTCACCCCCTTTAT-CGCTACTCATGTCAGC 2115 Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180 |||| |||| | | ||||| ||| | | || |||| |||| | || || || Sbjct 2116 ATTCGCACTTCCGATACCTCCAGCACCCTTT-ACAAGGCACCTTCGCAGGCTTACGGAAC 2174 Query 181 GCTCCCCTACCC--------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 |||| |||||| || ||| || || ||||||||| ||| |||| || Sbjct 2175 GCTCTCCTACCATGCGTGCTAAGCACGCAT----CCGCAGCTTCGGTATATAGCTTA-GC 2229 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| ||||| || |||| | | ||| || |||||||||||||||| ||||| |||| Sbjct 2230 CCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGG 2289 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| |||||||||||||| ||| | || |||| || ||||||||| | Sbjct 2290 GTGGCTGCTTCTAAGCCAACCTCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTA 2349 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | | || ||| ||||||||| | |||||| ||||||||||| Sbjct 2350 G-CTATATTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 2394 >seq3435 Length=174 Score = 140 bits (154), Expect = 8e-31 Identities = 100/115 (87%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| ||||||||| || ||| || || Sbjct 115 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCC 56 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCAT 115 ||||||||||||| | |||||||||||| ||| |||||||| |||||||||| Sbjct 55 CTGGAACCCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177514152960