Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq3068 237 1e-60 seq6180 87.8 1e-15 >seq3068 Length=5922 Score = 237 bits (262), Expect = 1e-60 Identities = 149/161 (93%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| Sbjct 4219 TCGAGTTGCAGAGTGCAATCCGGACTACGATCGGTTTTCTGGGATTAGCTCCCCCTCGCG 4278 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 4279 GGTTGGCAACCCTCTGTTCCGACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 4338 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||||||||||||||||||||||||||||| Sbjct 4339 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 4379 >seq6180 Length=170 Score = 87.8 bits (96), Expect = 1e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 50 TCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACC 109 ||| ||| ||| | || ||||| |||| |||||||| | | ||||||||| | Sbjct 170 TCCACCTTACGGTATCGCAGCCCTTTGTACCGGCCATTGTAGCATGCGTGAAGCCCAAGA 111 Query 110 CATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 |||||||| ||||| || ||||||||||||||||||||||||| Sbjct 110 CATAAGGGGCATGATGATTTGACGTCATCCCCACCTTCCTCCG 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415970621300