Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq3068 190 3e-46 seq1465 109 9e-22 >seq3068 Length=5922 Score = 190 bits (210), Expect = 3e-46 Identities = 216/290 (74%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||||| | |||| | |||||||||| ||| | Sbjct 4763 CCCACGCTTTCGTGCATGAGCGTCAGTATTGGCCCAGGGGGCTGCCTTCGCCATCGGTAT 4822 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| || |||||||||||||| ||||||| ||||||| ||||| | || Sbjct 4823 TCCTCCACATCTCTACGCATTTCACTGCTACACGTGGAATTCTACCCCCCTCTGCCATAC 4882 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || |||| | ||||||| |||||||||| | ||||||||| | || Sbjct 4883 TCTAGCCTGCCAGTCACCAATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCGGTCT 4942 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| | | | |||||| |||| ||| |||| ||||||| || |||||| Sbjct 4943 TAGCAAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCCTACG 5002 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||| |||||||| || |||| Sbjct 5003 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCCGGTA 5052 >seq1465 Length=221 Score = 109 bits (120), Expect = 9e-22 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| |||||||||||||| | | |||| | | |||||||||| ||||| Sbjct 103 CCCATGCTTTCGCTCCTCAGCGTCAGTTGCGGCCCAGAGACCTGCCTTCGCCATCGGTGT 44 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103 |||||| |||||| |||||| ||||||||||| |||||||| Sbjct 43 TCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828741468590