Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq3068 190 1e-46
seq5386 80.6 2e-13
>seq3068
Length=5922
Score = 190 bits (210), Expect = 1e-46
Identities = 126/140 (90%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct 947 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTG 1006
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||||| |||||| | |||| | ||||||| | |||||| ||| ||||||||||||||
Sbjct 1007 CTTTCGCACCTGCTCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTAT 1066
Query 121 CACTACGATTTCCGACCGTA 140
|| ||||||||||||||||
Sbjct 1067 CAGCACGATTTCCGACCGTA 1086
>seq5386
Length=225
Score = 80.6 bits (88), Expect = 2e-13
Identities = 92/121 (76%), Gaps = 6/121 (5%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGAC 57
||||||||||||||||||||| ||| |||||| || |||||||| |||||||| |
Sbjct 162 TACCTTTTATCCGTTGAGCGACGGCGCTTCCA--CA-AGCCACCGCCGGATCACTAGTTC 106
Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117
| |||||| |||||| | ||| |||| || |||||| | ||| ||| ||||||
Sbjct 105 CGACTTTCGTCCCTGCTCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCAC 46
Query 118 T 118
|
Sbjct 45 T 45
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351975943000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |