Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq3068 196 5e-48 seq5386 75.2 1e-11 >seq3068 Length=5922 Score = 196 bits (216), Expect = 5e-48 Identities = 137/156 (88%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 959 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 1018 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| ||||||||| |||| |||||||||||||||||| | |||||| || Sbjct 1019 CTCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCAGCACGATTTC 1078 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| |||| |||||||| ||||||||||| Sbjct 1079 CGACCGTACCTAGCGTACCTTCGTACTCCTCCGTTA 1114 >seq5386 Length=225 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| ||| |||||| ||| ||||||||||| || |||||| |||| Sbjct 150 GTTGAGCGACGGCGCTTCCACAAGCCACCGCCGGATCACTAGTTCCGACTTTCGTCCCTG 91 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| | |||| |||| ||||||||| ||| ||| ||||||| Sbjct 90 CTCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACT 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473566553480