Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq3376 284 2e-74 seq3068 271 1e-70 >seq3376 Length=237 Score = 284 bits (314), Expect = 2e-74 Identities = 205/237 (86%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 21 GATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACA 80 ||||| |||||| ||||||||||| ||| |||| ||||| ||| | |||| | ||| Sbjct 237 GATGCTTTCAGCGGTTATCCCTTCCGAACGTAGCCAACCAGCGGTGCTCCTGGCGGAACA 178 Query 81 ACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAA 140 ||||| ||||||||||| |||| ||||||||||||||||||| ||||||| | |||||| Sbjct 177 ACTGGCACACCAGAGGTTCGTCCGTCCCGGTCCTCTCGTACTAGGGACAGCCCTTCTCAA 118 Query 141 ATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTC 200 |||||| ||| | | |||||||||||||||||||||| ||||||||| |||||||||| Sbjct 117 GTTTCCTGCGCGCGCAGCGGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTC 58 Query 201 GCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGA 257 |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 57 GCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTCCAGCCCCAGGA 1 >seq3068 Length=5922 Score = 271 bits (300), Expect = 1e-70 Identities = 224/273 (82%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 ||| | | ||| |||||||||| |||||| ||||| ||||| ||| ||||| ||| || Sbjct 613 AGGCGAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGC 672 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 |||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||||| Sbjct 673 GATGCCACTGGCGTGACAACCGGTACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACT 732 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | | |||| || |||||| ||| ||||||||| | |||||||||| ||||||||| || Sbjct 733 AGGAGCAGCCCCCTTCAAATATCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACG 792 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||| | |||||||||| ||| ||||||||| ||||||||||| |||||||||||| Sbjct 793 ACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCG 852 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || |||||||||||||||| |||||||||||| Sbjct 853 GCTACAGCCCCAGGATGAGATGAGCCGACATCG 885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780744858440