Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq3068 401 2e-109
seq5240 84.2 5e-14
>seq3068
Length=5922
Score = 401 bits (444), Expect = 2e-109
Identities = 343/417 (82%), Gaps = 10/417 (2%)
Strand=Plus/Plus
Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60
|| ||||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||
Sbjct 5102 GTGCTTTACAACCCGAAGGCCTTCTTCACACACGCGGCATTGCTGGATCAGGCTTTCGCC 5161
Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120
|||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 5162 CATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 5221
Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180
|||||||||||| ||||||||||||||||| ||||||||||| ||| |||| |||||||
Sbjct 5222 GTGTGGCTGGTCGTCCTCTCAGACCAGCTACTGATCGTCGCCTTGGTAGGCCTTTACCCC 5281
Query 181 GCCAACTAGCTAATC--CCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCT 238
|||||||||||||| ||||| || | || |||| | ||||||||||||||||||
Sbjct 5282 ACCAACTAGCTAATCAGCCATC--GGCCAACCCTATAGCGCGAGGCCCGAAGGTCCCCCG 5339
Query 239 CTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCAT 298
|||| || || |||||||||||| | |||| || |||||||| | |
Sbjct 5340 CTTTCATCCGTAGATCGTATGCGGTATTAATCCGGCTTTCGCCGGGCTATCCCCCACTA- 5398
Query 299 CAGG-CAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTG 357
|||| || |||| | ||||||||||||| ||||||||| || | || ||||||
Sbjct 5399 CAGGACATGTTCCGATGTATTACTCACCCGTTCGCCACTCGCCACC--AGGTGCAAGCAC 5456
Query 358 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
| | || | ||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 5457 C--CGTGCTGCCGTTCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCAATCTGAG 5511
>seq5240
Length=265
Score = 84.2 bits (92), Expect = 5e-14
Identities = 120/164 (73%), Gaps = 15/164 (9%)
Strand=Plus/Plus
Query 256 TATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA--GGCAGTTTCC-CA 312
||| ||||||||||| | |||||| | |||||||| ||| ||||| || | ||
Sbjct 31 TATCCGGTATTAGCCCCGGTTTCCCGGAGTTATCCCGAAG--TCAAGGGCAGGTTACTCA 88
Query 313 GACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTG--CTTCCTGTTACCG 370
|||||||||||| ||||||| || || |||||||||| | || | ||
Sbjct 89 CGTGTTACTCACCCGTTCGCCACTAATCCGCC---CAGCAAGCTGGGCATCAT-----CG 140
Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|||||||||||||||||| || ||||||||||||| |||||
Sbjct 141 TTCGACTTGCATGTGTTAAGCACGCCGCCAGCGTTCGTCCTGAG 184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1222310887040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |