Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq3068 401 2e-109 seq5240 84.2 5e-14 >seq3068 Length=5922 Score = 401 bits (444), Expect = 2e-109 Identities = 343/417 (82%), Gaps = 10/417 (2%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || ||||||||||||||||||||||||| ||||||||||| |||| ||||||||| |||| Sbjct 5102 GTGCTTTACAACCCGAAGGCCTTCTTCACACACGCGGCATTGCTGGATCAGGCTTTCGCC 5161 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 5162 CATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 5221 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 |||||||||||| ||||||||||||||||| ||||||||||| ||| |||| ||||||| Sbjct 5222 GTGTGGCTGGTCGTCCTCTCAGACCAGCTACTGATCGTCGCCTTGGTAGGCCTTTACCCC 5281 Query 181 GCCAACTAGCTAATC--CCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCT 238 |||||||||||||| ||||| || | || |||| | |||||||||||||||||| Sbjct 5282 ACCAACTAGCTAATCAGCCATC--GGCCAACCCTATAGCGCGAGGCCCGAAGGTCCCCCG 5339 Query 239 CTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCAT 298 |||| || || |||||||||||| | |||| || |||||||| | | Sbjct 5340 CTTTCATCCGTAGATCGTATGCGGTATTAATCCGGCTTTCGCCGGGCTATCCCCCACTA- 5398 Query 299 CAGG-CAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTG 357 |||| || |||| | ||||||||||||| ||||||||| || | || |||||| Sbjct 5399 CAGGACATGTTCCGATGTATTACTCACCCGTTCGCCACTCGCCACC--AGGTGCAAGCAC 5456 Query 358 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | | || | ||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 5457 C--CGTGCTGCCGTTCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCAATCTGAG 5511 >seq5240 Length=265 Score = 84.2 bits (92), Expect = 5e-14 Identities = 120/164 (73%), Gaps = 15/164 (9%) Strand=Plus/Plus Query 256 TATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA--GGCAGTTTCC-CA 312 ||| ||||||||||| | |||||| | |||||||| ||| ||||| || | || Sbjct 31 TATCCGGTATTAGCCCCGGTTTCCCGGAGTTATCCCGAAG--TCAAGGGCAGGTTACTCA 88 Query 313 GACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTG--CTTCCTGTTACCG 370 |||||||||||| ||||||| || || |||||||||| | || | || Sbjct 89 CGTGTTACTCACCCGTTCGCCACTAATCCGCC---CAGCAAGCTGGGCATCAT-----CG 140 Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||| || ||||||||||||| ||||| Sbjct 141 TTCGACTTGCATGTGTTAAGCACGCCGCCAGCGTTCGTCCTGAG 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222310887040