Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq3068 338 2e-90 >seq3068 Length=5922 Score = 338 bits (374), Expect = 2e-90 Identities = 289/359 (81%), Gaps = 26/359 (7%) Strand=Plus/Minus Query 165 CTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAG 224 ||||||||||||||||| ||||| ||| |||||||||||||||||||||| | ||||| Sbjct 5298 CTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCTGGTCTGAG 5239 Query 225 AGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTG 284 ||| || | |||||| ||| |||||||||||| ||| |||||||||||||||||||||| Sbjct 5238 AGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG 5179 Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344 |||||| ||| ||||||||| |||||||||| |||||| |||||||| | || ||||||| Sbjct 5178 GGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCC 5119 Query 345 TTCGGGTCGTAAAGC---TCTGTCCTCAAGGAA------------GATA----------A 379 ||||||| ||||||| | ||||| || ||| ||| | Sbjct 5118 TTCGGGTTGTAAAGCACTTTTGTCCGGAAAGAAATCCTTGGCTCTAATACAGTCGGGGGA 5059 Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 ||||||||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct 5058 TGACGGTACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 4999 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 ||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||| |||| Sbjct 4998 GGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAG 4941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497490824960